Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1817 ATGGTGAACTTGTCTTTGCTGCTCAAATATCAATCATTAGCAATCATATTCACTATCATAGCCTTAACCAAAGTTAATTCCTTTTATTTCAATTTCCCAACCTTCCAACAAAGTGATAGATCAACCAACTTTCTACTAAGCAAATACTCAAACATATACAAAGATGATATCCAAGTAACCCCAGATAATCGCGGTAGTCCAATATCAAATTATTCTGGACGTGCTTTTTACAAAAAGCCATACACACTTTGGAAGAAAAACAAACTTTCTTCTTTCAACACAACTTTTGTTCTCAACATAAGTCCTGTAACTTCCCCTCGTGGAGAAGGCATAGCCTTTATCTTAACTTCAGATACAACTCTCCCCGACGAAAGTGATAACACAACTGCAAATCCTAATTCTCCAGATGGAATTCTTGCCGTGGAGTTCAATACACGACAAAGTTCCACACAAGATCGTCCTGACAACCTTGTTGGAATCAATATAAACAGTATCTTTGGTTTGAAACAAGCATCATTGGAAAACACTAAGGTCAATCTTTCATCTGGTTTAGATGTAACTATGAGAATTCAATATTCCAATGATATAATATCTGTTTTTGGTTCAATGAGTAATTCAAATGATTCTATGGAAACCCTTTTGGTATCTCCACCTCTTAGTCTCGCTTCTTTTCTTAAACAAGAGGTTTATGTCGGATTCTCTGCTTCAACAAGCAATACCACAGAGACAAACAGTGTAAGAGCATGGGAATTCAACGGGGTAGATATTGCAAATAGTAATAAGAATAATCTCTTGCAGATTATTTGGATTATAATTCCAATTGTGATAATCATAGGTGTGTTGGTATTTTTCTTGGTATATCGGAACGTGAAAAGAAGCATGGAGATTCAAGAAGATACATATCCAAGGATAGAGGATCAAATTCAGTACTCGTCAATGGCACCAAAGAAATATCGACTAAAGGAATTGATGAAAGCAACAGGTGGATTCAGCCATCAGAACAAGCTTGGTGAAGGGGGATTTGGAACTGTTTATAAGGGATTCCTTGGAAAAAACAATAAAGAGATAGCTGTGAAGAGAGTCTCGAAGAATTCACGTCAAGGAAAGAAAGAATTTATAGCCGAAGTTACAACAATTGGAAGCCTTCACCACAAAAACTTGGTGAAACTCATTGGTTGGTGCTATGAAAATAAAGAGCTTCTCCTTGTTTATGAGTTCATGCCAAATGGAAGCTTAGACAAATACCTATTTAATAAAACAAGGGAATTAGAGTTACATTTTTCAAAAGTACTTGCTTGGAAAACAAGAAATAGTGTGATTGGTGACGTGGCGCAAGCATTGGATTATCTTCACAATGGTTGTGAAAAAAGGGTACTTCATAGAGACATTAAAGCAAGCAACATAATGTTAGATTTTGATTACGTTGCAAAATTGGGTGATTTTGGATTGGCGCGAATAGTACAAATGAGAAATGAAACTCATCATTCAACAAAGGAAATTGCAGGAACACCGGGCTATATGGCACCGGAAATATTTTTAACCGGAAGAGCGACGGTTGAAACAGATGTTTATGCATTTGGTGTACTTGTTTTGGAAGTTGTGTGTGGAAAAAGACCAAGAAATATGTATGCACAAGATGATTATAAATACAGTATTGTGTATTGGGTTTGGGAACTTTATGGAGAGGGAAAAATAGTTAGTGCAGTTGATGATAGGATAAGTAGTGAAGAGGAAGAAATTGAAAAGGTTGAAATTGTGCTTATTCTTGGGTTGTCTTGTTGTCATCCAAATCCACATGAAAGACCATCAATGAAAACTGTATTGATGGTTCTTAATGGAGAAGCTTCTCCTCCAATGGTTCCGATTGAAAGACCGGCTTTTGTATGGCCTGCTATGCCTTCATCTTTCAAACAAAATGAGAATGGTTCTCTTATCAGTGGAACTCTCACTCCATTCACTCAACTTGGTGGTAGATAA 1977 0.3652 MVNLSLLLKYQSLAIIFTIIALTKVNSFYFNFPTFQQSDRSTNFLLSKYSNIYKDDIQVTPDNRGSPISNYSGRAFYKKPYTLWKKNKLSSFNTTFVLNISPVTSPRGEGIAFILTSDTTLPDESDNTTANPNSPDGILAVEFNTRQSSTQDRPDNLVGININSIFGLKQASLENTKVNLSSGLDVTMRIQYSNDIISVFGSMSNSNDSMETLLVSPPLSLASFLKQEVYVGFSASTSNTTETNSVRAWEFNGVDIANSNKNNLLQIIWIIIPIVIIIGVLVFFLVYRNVKRSMEIQEDTYPRIEDQIQYSSMAPKKYRLKELMKATGGFSHQNKLGEGGFGTVYKGFLGKNNKEIAVKRVSKNSRQGKKEFIAEVTTIGSLHHKNLVKLIGWCYENKELLLVYEFMPNGSLDKYLFNKTRELELHFSKVLAWKTRNSVIGDVAQALDYLHNGCEKRVLHRDIKASNIMLDFDYVAKLGDFGLARIVQMRNETHHSTKEIAGTPGYMAPEIFLTGRATVETDVYAFGVLVLEVVCGKRPRNMYAQDDYKYSIVYWVWELYGEGKIVSAVDDRISSEEEEIEKVEIVLILGLSCCHPNPHERPSMKTVLMVLNGEASPPMVPIERPAFVWPAMPSSFKQNENGSLISGTLTPFTQLGGR* 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1817 658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Mtr1g1817 658 Pfam Protein kinase domain 331 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1817 658 ProSiteProfiles Protein kinase domain profile. 330 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1817 658 PANTHER - 13 644 - -
Mtr1g1817 658 Gene3D Phosphorylase Kinase; domain 1 315 406 - -
Mtr1g1817 658 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.5-RELATED 13 644 - -
Mtr1g1817 658 ProSitePatterns Protein kinases ATP-binding region signature. 336 359 IPR017441 GO:0005524
Mtr1g1817 658 SUPERFAMILY Protein kinase-like (PK-like) 311 611 IPR011009 -
Mtr1g1817 658 Gene3D Transferase(Phosphotransferase) domain 1 407 617 - -
Mtr1g1817 658 Gene3D - 25 267 - -
Mtr1g1817 658 Pfam Legume lectin domain 30 263 IPR001220 GO:0030246
Mtr1g1817 658 CDD lectin_legume_LecRK_Arcelin_ConA 28 252 IPR001220 GO:0030246
Mtr1g1817 658 CDD STKc_IRAK 336 613 - -
Mtr1g1817 658 SMART serkin_6 330 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1817 658 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 252 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1817 Mtr-Chr1 26837996 26840152 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1817 85 626 Receptor kinase-like Gene Family AT3G53810 37.871 3.34e-112 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr1g1817 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1817 - - gmx:100785031 887.871
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1817 1 26837996 26840152 Mtr1g1817 1 26837996 26840152 ECH