Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1814 ATGTTTTCTTGGTTAGCAAGGATAGTTTCAGCGTGCTTGAGACCAGTTCGACGCTATGCACGTATGAACAAAGACAATGAAAATGATTCTGATGAGTCATCAACATCTGAAGATGCTCTTGTTTGGTGTAAAGACCTTGAGAAACACTCTTGTGGTGAATTCTCCTTTGCTATTGTTCAAGCTAATGAAGTAATTGAGGATCATAGTCAAGTTGAAACTGGTTCTGATGCTGTTTTTGTTGGTGTTTATGATGGTCATGGTGGTCCTGAAGCTTCTAAGTTTGTTAATGATCATCTCTTTCATCATCTCATAAGGATTGGTAAAGAAAACGGTTCTATCTCCGAAGATATTATAAGGAATGCTGTTTCTGCTACGGAGGATGGATTTATGACTCTTGTTCGAAGGAGCTTTGGAATAAAGCCACTGATAGCAGCAATGGGTTCATGTTGTCTCGTCGGTGTTATCTGGAAAGGGACACTTCATATCGCTAATCTTGGAGATTCTCGTGCTGTGATCGGTTCAACTGGTCGATCTAACAAGATCGTTGCTGAACAATTGACCAAAGAGCATAATGCCTGCAAAGAGGAGATCAGAAGAGAACTCAAGTCTTTGCATCCAGAAGATTCACAAATTGTTGTTATGAAACATGGAACATGGCGTATTAAAGGCATCATTCAGGTATCAAAATCTATAGGAGATGCATATTTGAAGCGTCCGGAGTTCTCATTTGATCCTTCATTCCCGCGGTTCCACTTGCCTGATCCTATCAGCCGACCGGTGTTATCAGCAGAACCATCTATGTGTTCAAGAGTTTTACAACCTAACGATAAATTTGTCATATTTGCATCTGACGGCCTTTGGGAACACATGACAAATCAGGAAGCTGCTGAGATCGTTCATAACAACCCTAGAACTGGGAGTGCAAGAAGGCTTCTTCAGGCTGCTTTGACTGAGGCAGCACGGAAAAGGGAAATGAGATATAAAGATTTGCAGAAGGTTGAAAAGGGAATTCGGCGTTTTTTCCATGATGATATCACAGTGGTCGTTATCTTCATCGACCATGAGATGCAAAAGAAGAATGTTAATGTTCCTGAGTTATCCATCAAAGGGTTTATCGACACAGTTGGACCATCAAAATTTAGAAGTTTCCAAGAACCTCAATGA 1164 0.4081 MFSWLARIVSACLRPVRRYARMNKDNENDSDESSTSEDALVWCKDLEKHSCGEFSFAIVQANEVIEDHSQVETGSDAVFVGVYDGHGGPEASKFVNDHLFHHLIRIGKENGSISEDIIRNAVSATEDGFMTLVRRSFGIKPLIAAMGSCCLVGVIWKGTLHIANLGDSRAVIGSTGRSNKIVAEQLTKEHNACKEEIRRELKSLHPEDSQIVVMKHGTWRIKGIIQVSKSIGDAYLKRPEFSFDPSFPRFHLPDPISRPVLSAEPSMCSRVLQPNDKFVIFASDGLWEHMTNQEAAEIVHNNPRTGSARRLLQAALTEAARKREMRYKDLQKVEKGIRRFFHDDITVVVIFIDHEMQKKNVNVPELSIKGFIDTVGPSKFRSFQEPQ* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1814 387 Gene3D - 18 363 IPR036457 -
Mtr1g1814 387 CDD PP2Cc 60 352 IPR001932 -
Mtr1g1814 387 Pfam Protein phosphatase 2C 66 320 IPR001932 -
Mtr1g1814 387 ProSiteProfiles PPM-type phosphatase domain profile. 53 352 IPR001932 -
Mtr1g1814 387 SUPERFAMILY PP2C-like 60 353 IPR036457 -
Mtr1g1814 387 Coils Coil 183 203 - -
Mtr1g1814 387 PANTHER ALPHABET, ISOFORM E-RELATED 6 372 - -
Mtr1g1814 387 PANTHER PROTEIN PHOSPHATASE 2C 68-RELATED 6 372 - -
Mtr1g1814 387 SMART PP2C_4 33 350 IPR001932 -
Mtr1g1814 387 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1814 Mtr-Chr1 26801889 26806274 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1814 1 383 PP2C-type Phosphatase Gene Family AT5G06750 69.565 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1814 K01102 - gmx:100813740 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1814 1 26801889 26806274 Mtr1g1814 1 26801889 26806274 ECH