Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1790 ATGATGGCTGAATCAACAACATCTAACAGGCAAAGCGATGATGATAACGATGACTACATGGCTGACCTTTCTAAGTTTCTTCCTTCCGATGATGCCATTATTCATCCTTCAATTCCATCAAAAAGGATTTCTGACAAGAAAGATCCTTCAATCAACTCTTCCAAGAGCCAATTGAAAGCTCTTAACTGGCAAGAACGGCGAAAAATTGAAAGAGAAAGAAAGCAAATACAAGAGGATGAACAAACATTAGCAAAAGTGGAAGCTCCAATACCACAATCAAACATTGGTTTTAAGCTTCTCAAACAGATGGGTTATACACCAGGTTCTGCCCTTGGCAAGCAGGGATCGGGCAGGGCTGAACCAGTCGGAATTGAAATTCGAAGGTCACGAGCAGGTATAGGCCTAGAGGATCCCCACAAGGAGAAGAAGAAAAGGGAGGAAATCACGATCGACAGGAAAAGGAAGAATGAGCAGGCTCTGATGGAAGAATTCGGGTCAAGGCAGAAGTCACGATGGCAGAGTAGGAGAGTTATTGTTAATTTCAACAAGGCAAAGGCTACCCTTGACCAATTGGAGAATCGGGAAATTGTGGAACCAACGAAGAACGAGGATGATGCTGAGGGTGAAGATCAAGAAGAGGAAGAAATAACAGAAGAGGACTTGCTCGATGTATTAATGAAACTGAGGGATGAGTTCAATTACTGCCTCTTCTGTGGATGCAAATATGAATCAAGTTCTGCACTTTTGGATAACTGCCCTGGAATCAATGAAGATGACCACTAA 783 0.4266 MMAESTTSNRQSDDDNDDYMADLSKFLPSDDAIIHPSIPSKRISDKKDPSINSSKSQLKALNWQERRKIERERKQIQEDEQTLAKVEAPIPQSNIGFKLLKQMGYTPGSALGKQGSGRAEPVGIEIRRSRAGIGLEDPHKEKKKREEITIDRKRKNEQALMEEFGSRQKSRWQSRRVIVNFNKAKATLDQLENREIVEPTKNEDDAEGEDQEEEEITEEDLLDVLMKLRDEFNYCLFCGCKYESSSALLDNCPGINEDDH* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1790 260 PANTHER G PATCH DOMAIN-CONTAINING PROTEIN 11 15 260 - -
Mtr1g1790 260 ProSiteProfiles G-patch domain profile. 92 138 IPR000467 GO:0003676
Mtr1g1790 260 MobiDBLite consensus disorder prediction 202 217 - -
Mtr1g1790 260 Pfam G-patch domain 92 135 IPR000467 GO:0003676
Mtr1g1790 260 SMART DUF4187_2 206 260 IPR025239 -
Mtr1g1790 260 MobiDBLite consensus disorder prediction 193 217 - -
Mtr1g1790 260 Pfam Domain of unknown function (DUF4187) 209 260 IPR025239 -
Mtr1g1790 260 Coils Coil 143 163 - -
Mtr1g1790 260 PANTHER UNCHARACTERIZED 15 260 IPR039249 -
Mtr1g1790 260 SMART G-patch_5 90 136 IPR000467 GO:0003676
Mtr1g1790 260 MobiDBLite consensus disorder prediction 1 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1790 84 134 C2H2 Transcription Factor Family AT5G26610 45.098 5.28e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1790 - - gmx:100806249 379.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1790 1 26253245 26257553 Mtr1g1790 1 26253245 26257553 ECH