Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1788 ATGTTCCATGCAGCGGACGGCTCTCCTCCTTGGGGATTTCCTTTGGACGATGTACCACTTGAACACAATATCAGTCGCCCACCCACAACCCAGGCAAATGCCATCCAGAATTTTGCTCCTCCTAATGCAAGAAAACAGAAGAAGAAACGAATTGGTCCTGGAGGAATAGCTTTTATGGTTGGTGGGGGAACATTATTGGTAACAGGATTGGCTCTCTTCCTTGCGATCCATTTGAATAAAATTCACACAGAGAGACAAAAGAGCTTCGTCTTCGTAAGCAACCGCCATAGTCCACTTCCTTCACATCCAATCAGTGCAGCCAATGAAATAACAAGAAGAAGCTTTTCTACGGCACAAGATGATAGCCTGCAAATCCCACCTTTCAATGCTGCATCTCTTTTAGATCCAAGGCGACTGCCTTCCCAGAACCATAAAAGAATGGTGGAAAAAACAAGAAGAAGTTTTTCTGAAAGAGACAAATACACCAGAAGGACGAAGGTTTACACAGTAGCTGAGGTTCAGTTGGTTACTAACAATTTCAGTGAAGACAACCTTCTGGGAGTAGGCTCTCTTGGCCCTGTTTACAGAGCTGAGTTACCAGATAACAAGGTTTTGGCTGTGAAGACTATCCAAATGGCAGGTTTGTCTTTCACTGAAGAAGAAAAGTTCTTAGACGTGGTCTGTACCGCTTCCCGTCTGAAGCATCCCAACATTGTTGCACTTAAAGGTTACTGTTTGGAGCATGGACAACATCTTCTTGTCTATGACTATGTCAGAAATTTAACTCTAGATGATGCTCTACACAGTGCAGCATTCAAACCTTTATCTTGGGGCCTTCGTCTACGAATTGCTCTAGGTGTTGCACAAGCTATAGACTATCTGCACTCCACGTTCTCCCCTCCTGTCACTCATGGCAACTTGAAGGCTGCCAATATTCTACTGAATGAAAACCTGATGGCTCGTGTTTCTGACTGTGGCTTGGCTATTTTAAAACCACTGACCAACACTACAACCAAGATTCGGGCTTCTGAGATTGCTATTAGAGATTCTGGGTATGATTCACCTGAGCATGGCCAACTGGGAGCTTGCTGCACAAAGAGCGACGTCTTTGCCTTTGGGGTGCTGCTTTTGGAGCTGTTGTCAGGAAGAAAACCTTTTGAAAGTTTTATGAGAAAGGAAGAGCAGTATCTAGCAAAATGGGCTTCAACAAGGCTTCATGATAACGAGAGTTTGGAGCAGATGGTGGATCCGGCAATTAAAAGAACATTCTCATCTAAAGCTCTTTCTCGTTATGCTGATATCATTTCTCTATGCACTCAGCCTGTAAAGGAATTCAGACCTCCAATGTCTGAAATTGTGGACTCTCTTGTATCTTTTATGCGAAGGCTCAATGTTTCAAAGAGTGCTGGTGGTGTAGCTGATGGAACTGAACTTGACCCATTTGAGAGATCTTTTCGTACAACCACCTCCCGCTTTATGCCTTCACCATCATTGAGCTATGTATCTGTTTGA 1512 0.4385 MFHAADGSPPWGFPLDDVPLEHNISRPPTTQANAIQNFAPPNARKQKKKRIGPGGIAFMVGGGTLLVTGLALFLAIHLNKIHTERQKSFVFVSNRHSPLPSHPISAANEITRRSFSTAQDDSLQIPPFNAASLLDPRRLPSQNHKRMVEKTRRSFSERDKYTRRTKVYTVAEVQLVTNNFSEDNLLGVGSLGPVYRAELPDNKVLAVKTIQMAGLSFTEEEKFLDVVCTASRLKHPNIVALKGYCLEHGQHLLVYDYVRNLTLDDALHSAAFKPLSWGLRLRIALGVAQAIDYLHSTFSPPVTHGNLKAANILLNENLMARVSDCGLAILKPLTNTTTKIRASEIAIRDSGYDSPEHGQLGACCTKSDVFAFGVLLLELLSGRKPFESFMRKEEQYLAKWASTRLHDNESLEQMVDPAIKRTFSSKALSRYADIISLCTQPVKEFRPPMSEIVDSLVSFMRRLNVSKSAGGVADGTELDPFERSFRTTTSRFMPSPSLSYVSV* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1788 503 SUPERFAMILY Protein kinase-like (PK-like) 156 456 IPR011009 -
Mtr1g1788 503 ProSiteProfiles Protein kinase domain profile. 180 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1788 503 Pfam Protein tyrosine and serine/threonine kinase 184 456 IPR001245 GO:0004672|GO:0006468
Mtr1g1788 503 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 2 481 - -
Mtr1g1788 503 Gene3D Transferase(Phosphotransferase) domain 1 259 471 - -
Mtr1g1788 503 PANTHER OS01G0253100 PROTEIN 2 481 IPR045271 GO:0004714|GO:0006468
Mtr1g1788 503 Gene3D Phosphorylase Kinase; domain 1 141 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1788 Mtr-Chr1 26204584 26208431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1788 2 502 Strubbelig Receptor Gene Family AT5G06820 51.491 7.38e-150 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Mtr1g1788 PK_Tyr_Ser-Thr 7.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1788 - - cam:101498175 833.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1788 1 26204584 26208431 Mtr1g1788 1 26204584 26208431 ECH
Mtr7g2704 7 43742897 43749688 Mtr1g1788 1 26204584 26208431 PCT