Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1782 ATGGGGTTTTCTTTGGCTTTTGAAGAAGCTGAACAACAAGAACAAGTAGATGCAAGTTTTTTAGGTACAAATAACAATTCTATGCTCATGGCTTCCAAAAACTCACATGAATCTCTTCAACAACAACAAAATCTTCTTCATCATCATCAACAACAACAACAGAATCAACATCATCCTCATCATATGCATGACCATCAAATTTCTTTTGGAATGATGCCATCTTCATCTTCATCCTCTATGCCTAGCAACTACTTAAACAAAGATTCAAGTGCTTATGATTTAGGTGAATTGGATCAAGCATTTTTTTTGTATCTAGATGGACAAGCACAAGCTGATCCTTCTAATGTTCCAGATCAAAGACAGAATTCATCATCATCAGGAATGAAACCACCACCAACTCTTAACATTTTCCCATCTCAACCAATGCATGTAGCACCACCACCATCTAATTCAAAGGTTAGCATGGGATTAACCTCTCCAATAACAAGTGGCTCCAAAAAACCATCTCAACCGTCCATGGAGTTGGCAAACCAACGAAATGAAAACCCTTCTGCACCTGCACCACCAAAACCTGTCAAGAAAGAGAATAATCGCAAGGGTACAACTTCAAGTTCTGAACATGAAGGACCAAAAACACCAGATCCTAAGACTCTTAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGAAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAGCTAGAAACAAGTAGGATTAAGCTTAATCAGCTTGAACAAGAGTTACAGCGTGCTAGAGCTCAAGGCGTGTTAATGGGTGGAGGTGCAGTTTTGGGAGGAGACCAAGGAATTCCAATTTCTCTGAATAGCATTAGCTCAGAGGCTGCAATGTTTGATGTGGAGTATGGGAGGTGGTTAGAGGAGCATCACAGGCTAGTGTGTGAGCTAAGAGCAGCACTAGATGAACATTTGCATGAAAATGAGCTTAGGTTATATGTGGAAAATTGTTTGGCTCACTATGATCAAGTAATTAACCTCAAAAATATTCTAGCTAGAACAGATGTGTTCCATCTTGTTTTTGGAATGTGGAAAACCCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAGACCATCTGAACTCATTAAGATAATTGTAAGTCAAATTGAGCCTCTTACGGAGCACCAGATACTTGGTATATGTGGGTTGCAACAATCAACACAAGAGGCAGAAGAAGCACTTTCCCAAGGGCTTGATGCACTCAACCAATCTCTTTCAGAGACTATAACATCAGATTCTTTAAGCAATCCTCCTAATATGGCTAACTATATGGGACAAATGGCTCTTGCCATGAACAAGCTCTCCACTCTTGAAAGTTTTGTGAGACAGGCAGATAATCTGAGGCACCAAACAGTTCATCGTCTGCATCAGTTGTTAACAGTTCGTCAAGCTGCAAGATGTTTGGTTGCAATGTCTGAGTACTTTCATCGTCTTCGAGCATTGAGTTCTCTCTGGTTGACCCGTCCTCGCCAAGAATAG 1524 0.4075 MGFSLAFEEAEQQEQVDASFLGTNNNSMLMASKNSHESLQQQQNLLHHHQQQQQNQHHPHHMHDHQISFGMMPSSSSSSMPSNYLNKDSSAYDLGELDQAFFLYLDGQAQADPSNVPDQRQNSSSSGMKPPPTLNIFPSQPMHVAPPPSNSKVSMGLTSPITSGSKKPSQPSMELANQRNENPSAPAPPKPVKKENNRKGTTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARAQGVLMGGGAVLGGDQGIPISLNSISSEAAMFDVEYGRWLEEHHRLVCELRAALDEHLHENELRLYVENCLAHYDQVINLKNILARTDVFHLVFGMWKTPAERCFMWIGGFRPSELIKIIVSQIEPLTEHQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLSNPPNMANYMGQMALAMNKLSTLESFVRQADNLRHQTVHRLHQLLTVRQAARCLVAMSEYFHRLRALSSLWLTRPRQE* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1782 507 MobiDBLite consensus disorder prediction 69 83 - -
Mtr1g1782 507 MobiDBLite consensus disorder prediction 34 83 - -
Mtr1g1782 507 MobiDBLite consensus disorder prediction 112 133 - -
Mtr1g1782 507 MobiDBLite consensus disorder prediction 34 52 - -
Mtr1g1782 507 Gene3D - 215 264 - -
Mtr1g1782 507 SUPERFAMILY Leucine zipper domain 216 258 IPR046347 GO:0003700|GO:0006355
Mtr1g1782 507 MobiDBLite consensus disorder prediction 192 219 - -
Mtr1g1782 507 SMART brlzneu 212 298 IPR004827 GO:0003700|GO:0006355
Mtr1g1782 507 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 214 258 IPR004827 GO:0003700|GO:0006355
Mtr1g1782 507 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 219 234 IPR004827 GO:0003700|GO:0006355
Mtr1g1782 507 PANTHER TRANSCRIPTION FACTOR TGA9 103 506 - -
Mtr1g1782 507 Pfam bZIP transcription factor 216 254 IPR004827 GO:0003700|GO:0006355
Mtr1g1782 507 Coils Coil 235 262 - -
Mtr1g1782 507 MobiDBLite consensus disorder prediction 111 219 - -
Mtr1g1782 507 CDD bZIP_HBP1b-like 216 268 - -
Mtr1g1782 507 Pfam Seed dormancy control 307 382 IPR025422 GO:0006351|GO:0043565
Mtr1g1782 507 MobiDBLite consensus disorder prediction 151 183 - -
Mtr1g1782 507 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 103 506 - -
Mtr1g1782 507 ProSiteProfiles DOG1 domain profile. 289 503 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1782 Mtr-Chr1 25940151 25949557 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1782 83 507 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 63.801 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mtr1g1782 DOG1 3.6e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1782 K14431 - gmx:100815176 715.687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1782 1 25940151 25949557 Mtr1g1782 1 25940151 25949557 ECH
Mtr7g2695 7 43654210 43661407 Mtr1g1782 1 25940151 25949557 PCT