LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mtr1g1773	ATGGCTGAAATGTTAGACTATATCAGACTTTTATTCGTTTGGCTACTCTCTACCATTGCAATTCAAGCCATACTAACTAGAAAGAAGAACAAAAATCATCCTAGTACTCCCCCCACCCCTCCTGCTCTGCCTATCATAGGACATTTTCACCTTATAGCTAAGTTACCTCCCCATCAAAGTTTTCATAAGCTTTCAATTCGTTATGGACCCATAATGCAACTTTTCATTGGATCTATACCTTGTGTAGTAATTTCCAGTCCAGACATTGTCAAGGAGTTTCTTAAAACTCACGAATCTTACTTCTCGAATCGCTTTATAAGTTCAGTTATTCACAACTTAACATATGGCTCAAAGGATTTCATATTTGCGCCTTATGGTGAATACTGGAAGTTCATAAAAAAGATATGTATGTCTGAGCTTCTTGGCGGCAGAACCCTCGACAAGTTTCTTCCTTTGAGGCAAAAAGAAACTATGAGGTTTCTTAGACTTTTGCAGACAAAAGGGGAAGCTCGCGAGGCTGTTAATGTTGGCGGCGAGCTCTTGAATCTCACGAATAGAATCATCACAACTATGGCAATGAGTAAAACATGTGCTGAAAACGATAGCGATGTGGAAGACATTAGGAAGATGGTGCAAGATAGTGTAGAGCTTTCAGGGAGGTTTAATTTGTCGGATTTTATTTGGTTTTTTAAGAATTGGGATATGCAAGGATTTAACAAAAGGCTTAAAGTGGTTATGGAGAGGTTTGACACATTGATGGAGAGGGTGATAAGGGAGCATCAAGTGGAAATGAAGAAAAGGAAAGAAAAGGGTGAAGGTGATCATGTTAGGGATCTACTTGATATTTTGTTAGAAATGCATGAGAATGAGAACACAGAAATAAAATTGACAAGAGAGAATGTCAAAGCTTTAATCTTGGATATATTCATGGCAGGAACTGAAACATCTGCGACAACGATCGAATGGGCTCTAGCTGAGTTAATAAACAACCCACATGTGATGGAGAAAGCACGGAAAGAGATTGATTCACAAATAGGGAGGAGTAGATTAATTCAAGAGTCCGATCTTCCCAATCTTCCGTATTTGCGAGCTACACTCAAAGAAACACTAAGACTTCACCCTACCGTACCAGTAGTGGTGAGAGAATCATCTGAGAATTGTAATGTTTGCGGGTTTGAGATTCCAGCGAAGACTATTTTATTTAGTAATTTGTGGTCCATGGGAAGGGACCCAAAATTGTGGGAGAATCCATATGAGTTTAAACCAGAGAGGTTTATGAGTGAAGAGAATAAGTTTGATGTGAGGGGACAAAATTTCCAATTTATGCCATTTGGAACTGGAAGGAGGTCTTGCCCTGGTGCTTCATTAGCACTTCAGGCTGTTCCGACAAATCTTGCCGCAATGATTCAGTGTTTTGAATGGAAGGTTGGTGGTAATGGAAAAGTTAACATGGATGAGAAAGCGGCCACGAGCCTTCCAAGGGCTCATCCTTTGATTTGTGTCCCGATTCCTCGCTTTAATTGTTTTCCTTTTGGTGAGTAG	1542	0.3995	MAEMLDYIRLLFVWLLSTIAIQAILTRKKNKNHPSTPPTPPALPIIGHFHLIAKLPPHQSFHKLSIRYGPIMQLFIGSIPCVVISSPDIVKEFLKTHESYFSNRFISSVIHNLTYGSKDFIFAPYGEYWKFIKKICMSELLGGRTLDKFLPLRQKETMRFLRLLQTKGEAREAVNVGGELLNLTNRIITTMAMSKTCAENDSDVEDIRKMVQDSVELSGRFNLSDFIWFFKNWDMQGFNKRLKVVMERFDTLMERVIREHQVEMKKRKEKGEGDHVRDLLDILLEMHENENTEIKLTRENVKALILDIFMAGTETSATTIEWALAELINNPHVMEKARKEIDSQIGRSRLIQESDLPNLPYLRATLKETLRLHPTVPVVVRESSENCNVCGFEIPAKTILFSNLWSMGRDPKLWENPYEFKPERFMSEENKFDVRGQNFQFMPFGTGRRSCPGASLALQAVPTNLAAMIQCFEWKVGGNGKVNMDEKAATSLPRAHPLICVPIPRFNCFPFGE*	514

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mtr1g1773	513	SUPERFAMILY	Cytochrome P450	37	505	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	Pfam	Cytochrome P450	37	494	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	ProSitePatterns	Cytochrome P450 cysteine heme-iron ligand signature.	444	453	IPR017972	GO:0005506\|GO:0016705
	Mtr1g1773	513	PRINTS	P450 superfamily signature	311	328	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	P450 superfamily signature	364	375	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	P450 superfamily signature	442	451	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	P450 superfamily signature	451	462	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	E-class P450 group I signature	65	84	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	E-class P450 group I signature	89	110	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	E-class P450 group I signature	300	317	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	E-class P450 group I signature	320	346	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	E-class P450 group I signature	363	381	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	E-class P450 group I signature	403	427	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	E-class P450 group I signature	441	451	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PRINTS	E-class P450 group I signature	451	474	IPR002401	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PANTHER	CYTOCHROME P450 FAMILY PROTEIN	3	511	-	-
	Mtr1g1773	513	Gene3D	Cytochrome P450	22	498	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Mtr1g1773	513	PANTHER	FLAVONOID 3'-MONOOXYGENASE-RELATED	3	511	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mtr1g1773	Mtr-Chr1	25499703	25501697	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mtr1g1773	1	505	Cytochrome P450	AT5G06900	48.323	1.08e-169	487

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mtr1g1773	K24188		-	gmx:100805931	708.753

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mtr1g1773	1	25499703	25501697	Mtr1g1773	1	25499703	25501697	ECH