Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1762 ATGCCACCTCATAACAACATCATCACTCTCCTCTTTCTCTTCCTCTCTCTCTCCATAACCTTCACTTCATCTCTCAACTCAGATGGTCTCTCTCTCCTAGCCCTTAAAGCAGCAATAGACGTGGACCCCACAGGAATCCTCACATCATGGTCAGACTCAGACTCACTTCCCACACCTTGCTCATGGGAAGGAATATCATGCACAAACAAGCAAGTCACTCAAATCACCCTCGTTTCAAAATCTCTAACAGGATACATCCCTTCCGAGCTAGGCCACTTAACTGAACTCACTACCCTTCAACTCTCAAACAACAATTTCACTAAAACTATTCCTTCATCACTTTTCACTAACAAACTCATCTTCTTAGACCTTTCTCATAATTCTCTTTCTGGTCCTCTTCCATCTTCACTCACTTCACTTACATCTCTTGTTCATTTTGATCTTTCTTCTAATTTTCTCAACGGCTCGTTACCTGAGTCGTTGAGTGAATTAATATCTTTAACAGGTACTTTGAATCTTTCTCATAATAGTTTCTCCGGTCAGATACCGGAGAAACTGGGGAATCTTCCTGTAGAGGTTAGTTTGGATCTTCGTGATAATATGCTTAGTGGGGAGATTCCTCAGGTGGGGTCCTTGCTTAATCAAGGACCTACTGCTTTTTCAGGAAACCCAGGACTTTGTGGGTTTCCGTTGAGGAATCTTTGTCAAGACGAGACAAAGGTTCCTGACTATTTACCGGAGAATCCGGATACTAACCCGAATGCAGTTCGGACTGAACCGGTTCAAGATGGGAGGGGGAGGGGTGGTTTGTTTGTTGTTGTTGGTTTGGTTTTGGTTTCTGTTGGGGTGGTGGTGGTTTTGATGTTGGTGGTTGTGAGGAGGCGACGGAGGAGGTTGAATGATAGGGAAGGTGGGTTTGAAAAGGGGAAAGTGGAAGGTGAGGTTTTAGGTTGTGGGGAGGAGCAGAAGGGGAGATTTGTGGTGGTGGATGAAGGGTTTGGGTTGGAATTGGAGGATTTGTTGAGGGCTTCAGCTTATGTGGTGGGGAAGAGTAGGAGTGGGATTGTTTATAAAGTTGTTGGTGGAGGGAAAGGGTCTGTTCCGGCAGCGACAGTGGCGGTTAGACGGTTGAGTGAGGGTGACGATGGTGGTTTACGGTTTAAGGAATTTGAGGCTGAGGTGGAAGCTATTGGGAGACTGAGACACCCTAATGTTGTGCCTTTGAGAGCTTATTACTATGCTAGTGATGAAAAACTTCTCATCACTGATTTCATTCGCAATGGAAGCTTGCACACTGCTTTGCATGGCAGGCCATCCGATTCATCGCCACCATTATCATGGGCAGCAAGAATAAAAATTGCACAAGGAACTGCAAGGGGATTGATGTACATACATGAGTTTAGTGGTAGGAAGTATGTCCACGGAAACATAAAATCAACGAAAATACTATTGGACGATGATCTCCATCCTTACATATCCGGTTTCGGACTTACTCGTCTTTGTTTAGGTACCTTAAAGTCTACCACATTCACACATAAGCGGCAGAACTCAAACCAGTCTATTGTTGTCTCAACAAAGAGTTCCAAAGTTGCTGCTAACTCTAAGAACTACATGGCACCTGAGGTGCGGATGTCTGGTGGAAAGTTCACTCAAAAATGCGATGTGTACTCTTTCGGTATTGTTTTGTTAGAACTTTTGACAGGTCGATTACCGGATTTAGGACCAGAAAGTGATCAAAAGGAGCTAGAGAGTTTCGTGAGGAAAGCATTCCAGGAGGAACAGCCCTTGTCAGAGATCATAGATCCAGCACTTTTGCCGGAGGTTAATGCTAAAAAACAAGTTGTTGCAGCGTTTCATGTTGCACTGAACTGCACAGAACATGATCCAGAATTGCGACCGAGAATGAGAACCATTTCTGAGAGCCTTGATCACATAAAAATTCAGTGA 1947 0.4432 MPPHNNIITLLFLFLSLSITFTSSLNSDGLSLLALKAAIDVDPTGILTSWSDSDSLPTPCSWEGISCTNKQVTQITLVSKSLTGYIPSELGHLTELTTLQLSNNNFTKTIPSSLFTNKLIFLDLSHNSLSGPLPSSLTSLTSLVHFDLSSNFLNGSLPESLSELISLTGTLNLSHNSFSGQIPEKLGNLPVEVSLDLRDNMLSGEIPQVGSLLNQGPTAFSGNPGLCGFPLRNLCQDETKVPDYLPENPDTNPNAVRTEPVQDGRGRGGLFVVVGLVLVSVGVVVVLMLVVVRRRRRRLNDREGGFEKGKVEGEVLGCGEEQKGRFVVVDEGFGLELEDLLRASAYVVGKSRSGIVYKVVGGGKGSVPAATVAVRRLSEGDDGGLRFKEFEAEVEAIGRLRHPNVVPLRAYYYASDEKLLITDFIRNGSLHTALHGRPSDSSPPLSWAARIKIAQGTARGLMYIHEFSGRKYVHGNIKSTKILLDDDLHPYISGFGLTRLCLGTLKSTTFTHKRQNSNQSIVVSTKSSKVAANSKNYMAPEVRMSGGKFTQKCDVYSFGIVLLELLTGRLPDLGPESDQKELESFVRKAFQEEQPLSEIIDPALLPEVNAKKQVVAAFHVALNCTEHDPELRPRMRTISESLDHIKIQ* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1762 648 Pfam Protein tyrosine and serine/threonine kinase 348 642 IPR001245 GO:0004672|GO:0006468
Mtr1g1762 648 Gene3D Transferase(Phosphotransferase) domain 1 425 648 - -
Mtr1g1762 648 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 648 - -
Mtr1g1762 648 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 8 648 - -
Mtr1g1762 648 Pfam Leucine rich repeat N-terminal domain 26 67 IPR013210 -
Mtr1g1762 648 Gene3D Ribonuclease Inhibitor 18 79 IPR032675 -
Mtr1g1762 648 Gene3D Ribonuclease Inhibitor 80 238 IPR032675 -
Mtr1g1762 648 ProSiteProfiles Protein kinase domain profile. 342 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1762 648 SUPERFAMILY Protein kinase-like (PK-like) 347 642 IPR011009 -
Mtr1g1762 648 SUPERFAMILY L domain-like 28 233 - -
Mtr1g1762 648 SMART LRR_typ_2 140 164 IPR003591 -
Mtr1g1762 648 SMART LRR_typ_2 93 117 IPR003591 -
Mtr1g1762 648 Pfam Leucine rich repeat 95 151 IPR001611 GO:0005515
Mtr1g1762 648 Gene3D Phosphorylase Kinase; domain 1 335 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1762 Mtr-Chr1 25218564 25222249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1762 25 646 Receptor kinase-like Gene Family AT3G57830 56.786 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr1g1762 PK_Tyr_Ser-Thr 6.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1762 - - gmx:100796011 761.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1762 1 25218564 25222249 Mtr1g1762 1 25218564 25222249 ECH