Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1759 ATGAATGTTCGATTTCCTGTTGATCAATCTTCAATAAATGCTGCTGGCCTGAAATGCCGTACTCAGCTGCCGATGAGCAATAAGATCCGCGGTCTTCAGGCCCCACGAATATCTGATAGGAAATTAGATATGGGCCTTAGAAAACCATCTTGCTCAACGATTATGGGCCGAACAACCAGAGGAGGTTACTTTGGATCATGCTTCTCCAAGCAAAGCGGAAATAATCAAGTAGTTAGTTCCATAGTATCTCGGAAGAGGCACAATAAAATTTTATTGTCAACCCAAATTATGTGTTTGAGGCTGATGGCACATAAAAAGAAAATGCTTTTAAAAATTAAAAGTAACGTGGGACAGATAACTTCGCCACAAGATTGTGCCTCTGATGAGAAGAATGGAAATGACCGCGACAAGAATGCTAAAGCCTCATGCGGGAATGAAGTTTACAAAGAATATTCCGTAATTGGAATACCTGGGGATGGAAGATGTATGTTCCGCTCAATTGCTCATGGCGCCCGTTTGAGGTCAGGAAAACCACCTCCTAGTGAAAGTATTCAGAGAGAGCTAGCTGATGATTTACGGGACAAGGTTGCTGATGAGTATGTCAAAAGAAAGGAACAGATGAAACAATGGTTTATTGAAGGTGATTTTGAATCAAATATTTCACAAATAAGGAAGCCTCATGTGTGGGGAGATGAACCCGAATTGTTCATCGCTTCACATGTTTTGCAGATGCCCATCGCTGTATACGTGTATGATCCGAAGGCTGGTGGCTTGATATCAAAATCCGAGTATGGCCAAGAATACGGCAAGGAAAATCCAATAAGAGTTCTCTATAATGGGTTTACTCATTATGATGCATTAGAGTTTCCTATAAGTAGAAGGAAGGGTTCTAAGTCAAGACTCTGGCATTTCACATTTCAAATGTTGAAGAGATTAAAAGCATTTATCTAA 951 0.4048 MNVRFPVDQSSINAAGLKCRTQLPMSNKIRGLQAPRISDRKLDMGLRKPSCSTIMGRTTRGGYFGSCFSKQSGNNQVVSSIVSRKRHNKILLSTQIMCLRLMAHKKKMLLKIKSNVGQITSPQDCASDEKNGNDRDKNAKASCGNEVYKEYSVIGIPGDGRCMFRSIAHGARLRSGKPPPSESIQRELADDLRDKVADEYVKRKEQMKQWFIEGDFESNISQIRKPHVWGDEPELFIASHVLQMPIAVYVYDPKAGGLISKSEYGQEYGKENPIRVLYNGFTHYDALEFPISRRKGSKSRLWHFTFQMLKRLKAFI* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1759 316 ProSiteProfiles OTU domain profile. 151 290 IPR003323 -
Mtr1g1759 316 PANTHER OTU DOMAIN CONTAINING PROTEIN 76 301 - -
Mtr1g1759 316 Gene3D - 127 289 - -
Mtr1g1759 316 MobiDBLite consensus disorder prediction 120 139 - -
Mtr1g1759 316 Pfam OTU-like cysteine protease 157 284 IPR003323 -
Mtr1g1759 316 SUPERFAMILY Cysteine proteinases 151 287 IPR038765 -
Mtr1g1759 316 PANTHER OS09G0487700 PROTEIN 76 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1759 Mtr-Chr1 25188872 25191142 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1759 156 287 C2H2 Transcription Factor Family AT1G50670 27.273 9.39e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1759 - - mtr:MTR_1g052380 440.269