Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1756 ATGAATCCGTCATCTATTTTGGTAGACAATTCTGTTGATAAATTGGTAAACACTATTCTTGAAGAAAATGAGGAACATGGACAAGAAAGTATTGCCGACATCAAACCTCGCTTGGATATGATATTTGAATCCGAGGTAGCTGCTTATGAATTTTATAATGAGTATAGTAAAAGAATTGGATTTGGTATTCGTCGAGAATATGGGAATAAAAGCAAAAAAGACGGGGTTTTAACTTCAAGAAGATTCACATGCTACAAAGAAGGTACACGAAGTGTTGACAAAAGACGTCAACCGACTGGGGAGTCTACGGCAGAAACTAGAACGGGGTGTAATGCACGTATGGGTATTTCACTTGATCGAAAGATAGGGAAATACAAGGTTGTTGACTTTGTACTAGAACACAACCACCTTCTTCAACCGCAAGAGTATGTTCACATGATTCGCTCTCATCGTCGCATATCTGAGGTACAAGCATCACAAATTATAATGGGAGATGAATCTGGATTAAGACCAAAAGAATTGCATGAATATATGTCCAAGCAGGCTGGTGGGATAGAGATGGTTGGTTTTACAAGAACAGACGCTAAGAATTTGCTTCGAACAAAAAGGATGGACTCACTAAAGTATGGTGAAGTGGGTGCATTGATGACTTATTTCAAACAAGAAAGCAAAAATCCATCTTTCTTTTATGACTTTCAAATGGATGTTGAAGAGCAAATAACAAACATATTTTGGGCAGATGCACAGATGATCAATGATTATGGGTACTTTGGTGATGTCGTTACTTTTGACACCACATACAAGACAAATAAGGGTTATCGGCCATTGGGAGTATTTGTTGGACTTAATAATCATCGGCAAACAATCATTTTTGGTGCAACATTGTTATATGATGAAACAATACCTTCTTTTCAGTGGTTATTTGAAACTTTTCTCAAAGCAATGAGTGGAAAAAAACCTAAAACCATTCTAACGGATCAAGATGCTGCGATGGCAAAGGGTATTTCTTTAGTTATGCCGGAGACATTTCATGGATTATGTACTTGGCATATAAGACAAAACGCTCTAAGGCATATGAACCATCTATATCAAAGGAGTATTTACCATGTGTGGCATCCATAA 1122 0.3725 MNPSSILVDNSVDKLVNTILEENEEHGQESIADIKPRLDMIFESEVAAYEFYNEYSKRIGFGIRREYGNKSKKDGVLTSRRFTCYKEGTRSVDKRRQPTGESTAETRTGCNARMGISLDRKIGKYKVVDFVLEHNHLLQPQEYVHMIRSHRRISEVQASQIIMGDESGLRPKELHEYMSKQAGGIEMVGFTRTDAKNLLRTKRMDSLKYGEVGALMTYFKQESKNPSFFYDFQMDVEEQITNIFWADAQMINDYGYFGDVVTFDTTYKTNKGYRPLGVFVGLNNHRQTIIFGATLLYDETIPSFQWLFETFLKAMSGKKPKTILTDQDAAMAKGISLVMPETFHGLCTWHIRQNALRHMNHLYQRSIYHVWHP* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1756 373 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 366 IPR031052 GO:0006355
Mtr1g1756 373 PANTHER OS03G0181600 PROTEIN 19 366 - -
Mtr1g1756 373 Pfam FAR1 DNA-binding domain 50 139 IPR004330 -
Mtr1g1756 373 Pfam MULE transposase domain 260 354 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1756 Mtr-Chr1 25127430 25128551 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr1g1756 MULE 2e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1756 - - cam:101500125 595.89