Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1753 ATGGAACAAACCACGTTCGAGTCGATTCAATTCAATGAAGAAATTCAAGGAATCATGGCTCCGGCGACGGAAACAGCGAACTCTTTCACCGCACTTCTTGAACTTCCACCGACGCAGGTCGTTGAGCTTCTTCACTCGTCGGAGATTACCGGAAAACCACCGAAACCCTATCCACTGACTTGCAACACCGGTAATTTAACTTTCCCTTCCAACGCCGCGTTGGTTGAACGCGCCGCTAGATTCTCCGTTTTCGCCGGAGAAAATTCCACAAACTCGCCGAACTTGCCGCAGGTGAAGGATGAGCTACCGGAGACTGAAGAAGGTGGATGTGTCTCTGATCCAACAGTTGAAAACACGAATTTCAAGAGTGCGAAGAGGAAGGAACGAGAGAAGAAGGTGAAATTGTCGTCTAAGAAGAGTAAGAGTATCGCCGCCGACGAGAATTCCGGCAACGGCGAGGAGCTTCCGTACGTTCACGTTCGAGTTCGACGAGGTCAAGCTACTGATAGCCATAGCTTAGCAGAAAGGGCTAGGAGAGAGAAGATAAATGCTCGAATGAAACTGTTGCAAGAGCTGGTCCCGGGTTGCAACAAGATTTTATCAATGAAACTGGCAGCAGTTAACCCAATAATTGATTTCAACCTTGACAGCATATTAGCTGCAGAAGGAATGTCTCTCATGGACAGTAACTTCCCTAACACAGTTTCACCCGCTGTGTGGCCAGAAATCCCACACAATGGAAACAGACAGCAATTTCAGCAATCGTGGCAATCTGATGCATTCCACCAACCACTTTGGGGGAGAGAAGAAAACAACCCTAATTTCATAACCCCAGAAAACTCACTTCTAAGTTATGACTCATCGGCAAATTCAGTATCTCTGCACTCAAATCAGATGAAAATGGAGCTATGA 912 0.4693 MEQTTFESIQFNEEIQGIMAPATETANSFTALLELPPTQVVELLHSSEITGKPPKPYPLTCNTGNLTFPSNAALVERAARFSVFAGENSTNSPNLPQVKDELPETEEGGCVSDPTVENTNFKSAKRKEREKKVKLSSKKSKSIAADENSGNGEELPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKILSMKLAAVNPIIDFNLDSILAAEGMSLMDSNFPNTVSPAVWPEIPHNGNRQQFQQSWQSDAFHQPLWGREENNPNFITPENSLLSYDSSANSVSLHSNQMKMEL* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1753 303 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 199 303 IPR024097 GO:0006355
Mtr1g1753 303 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 199 IPR024097 GO:0006355
Mtr1g1753 303 Pfam Helix-loop-helix DNA-binding domain 170 194 IPR011598 GO:0046983
Mtr1g1753 303 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 199 303 - -
Mtr1g1753 303 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 199 - -
Mtr1g1753 303 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 198 IPR036638 GO:0046983
Mtr1g1753 303 MobiDBLite consensus disorder prediction 123 150 - -
Mtr1g1753 303 Gene3D - 158 208 IPR036638 GO:0046983
Mtr1g1753 303 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 166 221 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1753 Mtr-Chr1 24898136 24903926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1753 2 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 44.414 1.62e-72 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mtr1g1753 HLH 7.5e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1753 - - aprc:113872810 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1753 1 24898136 24903926 Mtr1g1753 1 24898136 24903926 ECH
Mtr7g2681 7 43531986 43538897 Mtr1g1753 1 24898136 24903926 PCT