Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1748 ATGGTATTTTCAGGAAAGCAACATGGATGGGAAAAAACCAAAGACTACACCCTCCAAATCCTAACAGGAAGATGGTTTATGATGTTTTCATCATTTATGATCATGTCTGTATCTGGAGCAAGCTACATGTTTGGTCTATACTCAAGAGAAATGAAATCAGTTTTGGGTTATGACCAATCCACTCTCACTCTCTTAAGCTTCTACAAGGACTTAGGTTCTTGCATAGGAATTCTCTCAGGTCTACTCAATGAAATCACACCTCCATGGGTTGTCTTAACAATTGGTGGTGTTCTCAACTTTTTTGGCTATTTCATGATTTGGCTTGCAGTCACAAGAAAAATCTCGAAACCGCAAATATGGAATATGTGCTTATACACATTCATTGGAGCCAATTCGCATTGTTCAACCAACACTGGAGTTGTAGTCACCAGTGTAAGGAATTTCCCTGGTAGTAGAGGTATTGTCATAGGTCTTTTGAGTGGTTATCTTGGTTTGAGTGGAGCTATCATTACTCAACTATACTACGCCTTTTATGGAAATGACTCAAAATCTTTAATTTTGCTTATGGCTTGGTTACCAACTGTTGTAACTTTTGTTTTTACGCCGGTTATTAAGCATCACATGAGAGTTGAACAACCGAATGATTCCAAAGCTTTCTATAATTTTCTTTACATGACTTTAATCCTTGCAGGGTACCTCATGATAATGATCATAGTACAAAAATGTTTCAACTTTACTAAGAGTGAGTATTATGTCACTTCTATTCTAATGCTTCTCTTGCTCATCCTCCCTCTTTTTGTTGTTATTGTCGAAGAACAAAGAATTTGGAAGAACAAAAAAGAGCACATCAATGGCGAAGATTCTTCTCCTAAGCCTTTGAATATAATCACAAATATGCCACAAACTCGCCATGCTAGAAGAGAAAGTACTCAAAATGAAAAGCAAGTTTCGGCCTTTTGGGGAAACATACTATTTCCTCCAAGTAGAGGTGAAGATCATACAATATTTCAAGCCATTTTGAGCCTTGACATGATGACTCTTTTTGTATCCACAATATGTGGACTTGGTGGAACTCTTACTGTGGTAAATAACTTGAGTCAGATTGGATTATCTTTAGGATATCCTTCACATAGTATAACCACATTTGTTTCCCTTATGGCAATTTGGATCTATCTAGGTAAAGTTGCACAAGGGGTTATCTCAGAATTTATCATAACAAAGTTAAAACTCCCTAGACCTCTCATTCTAACATCAATCCTTACAGTATCTTGTTTTGGTCATCTTCTAATTGCATTTAATATCCCAAATGGTCTCTATGTAGCATCAATTATTATTGGTTTCTGCTTTGGAGCAAACTTGCCAGTACTATTTTCAATCATATCTGAACTATTTGGTCTTAAATATTACTCAACATTGTACAATGTTGGGTTAATAGCAAGTCCAATAGGGTCATACTTGTTAAGTGTTAGGGTTGCTGGTCATCTCTATGACAAAGAAGCCATAAAGCAAATGGCAGCATTAGGGTTAATGAGGAAGCCAGGGGAAGAGTTGAATTGCAATGGAAGTCAGTGCTACAAATTGGCTTTCATTATAATCACTGTTGTTAGCCTTTTTGGGGCACTTGTGTCTTTAACTTTGGTGATAAGGACTAGAGAGTTTTATAAAGGGGACATATACAAGAAGTTCAAAGAGGAAGCAAATACTGTTGAAAATGAATTGGTTGTTACTCAGAACAAGGTTGGACCTGTTTCAAATGATGGTTAG 1764 0.3662 MVFSGKQHGWEKTKDYTLQILTGRWFMMFSSFMIMSVSGASYMFGLYSREMKSVLGYDQSTLTLLSFYKDLGSCIGILSGLLNEITPPWVVLTIGGVLNFFGYFMIWLAVTRKISKPQIWNMCLYTFIGANSHCSTNTGVVVTSVRNFPGSRGIVIGLLSGYLGLSGAIITQLYYAFYGNDSKSLILLMAWLPTVVTFVFTPVIKHHMRVEQPNDSKAFYNFLYMTLILAGYLMIMIIVQKCFNFTKSEYYVTSILMLLLLILPLFVVIVEEQRIWKNKKEHINGEDSSPKPLNIITNMPQTRHARRESTQNEKQVSAFWGNILFPPSRGEDHTIFQAILSLDMMTLFVSTICGLGGTLTVVNNLSQIGLSLGYPSHSITTFVSLMAIWIYLGKVAQGVISEFIITKLKLPRPLILTSILTVSCFGHLLIAFNIPNGLYVASIIIGFCFGANLPVLFSIISELFGLKYYSTLYNVGLIASPIGSYLLSVRVAGHLYDKEAIKQMAALGLMRKPGEELNCNGSQCYKLAFIIITVVSLFGALVSLTLVIRTREFYKGDIYKKFKEEANTVENELVVTQNKVGPVSNDG* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1748 587 SUPERFAMILY MFS general substrate transporter 217 556 IPR036259 -
Mtr1g1748 587 CDD MFS_Mch1p_like 23 540 - -
Mtr1g1748 587 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 587 - -
Mtr1g1748 587 SUPERFAMILY MFS general substrate transporter 12 207 IPR036259 -
Mtr1g1748 587 PANTHER MFS TRANSPORTER 5 587 - -
Mtr1g1748 587 Pfam Nodulin-like 24 269 IPR010658 -
Mtr1g1748 587 Coils Coil 559 579 - -
Mtr1g1748 587 Gene3D MFS general substrate transporter like domains 250 510 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1748 Mtr-Chr1 24812083 24814066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1748 14 565 Nodulin-like Gene Family AT2G39210 58.393 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1748 - - gmx:100789645 835.099