Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1737 ATGGGTAAGAAGAGTAAGAAGAAGAGAAGTAGGGTTTCCGTCTCCGACAACGAAGATGAAGAAATGAAATCGGATAACAACGACGGTTCCAGTTCCGATCAAAACCCGAACTCACTCTACCAGGTTCTTGGTGTGGAGAAGACAGCAACTAAACAAGAAATAAAGAAGGCGTATCATAAATTGGCGTTGAGACTTCATCCTGATAAGAATCCTGGTGATGAGGAAGCTAAAGCCAAGTTTCAGCAATTGCAAAATGTTATCTCCATTCTCGGGGATGAAGAAAAACGGGCACTTTATGATGAAACTGGTTGTGTTGATCATGCTGACCTTGCAGGAGATGTAGTTCAGGATCTTCAAGAATATTTCAGAACATTGTACAAGAAGGTCACTGAAGCTGATATTGAGGAGTTTGAAGCAAACTATAGGGGATCTGACTCTGAGAAAAATGATTTAATTAGACTTTACAAGGAATGCAAGGGTAATATGAACAGGTTATTTTGTTCAATGCTTTGTTCGGATCCTAAACTCGACTCGCACCGATTCAAGGATATTATTGATGAGGCTATAGCTTCTGGAGAACTAAAGGAAAAGAAAGCGTACAAGAAATGGGCAAAGAAAATATCAGAAACCAAGCCGCCAACTAGTCCTTTACGAAGGAAGCAAAAATCAAGTAAGGAGCCAAAAACAGATTTGTATGCTATCATATCAAAACGACGAGATGAGAGGAAAGACCGGTTTGATTCTATGTTCTCGTCTCTAATATCAAAATATGGTGGAAGCCATGTGCCAGAACCCTCTGAAGAGGAATTTGAAGCTACGCAGAAAAAGATGGAAAGCCGAAGATCCGCAAAAAAGCCTAGGCGAAAGTAA 870 0.4034 MGKKSKKKRSRVSVSDNEDEEMKSDNNDGSSSDQNPNSLYQVLGVEKTATKQEIKKAYHKLALRLHPDKNPGDEEAKAKFQQLQNVISILGDEEKRALYDETGCVDHADLAGDVVQDLQEYFRTLYKKVTEADIEEFEANYRGSDSEKNDLIRLYKECKGNMNRLFCSMLCSDPKLDSHRFKDIIDEAIASGELKEKKAYKKWAKKISETKPPTSPLRRKQKSSKEPKTDLYAIISKRRDERKDRFDSMFSSLISKYGGSHVPEPSEEEFEATQKKMESRRSAKKPRRK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1737 289 MobiDBLite consensus disorder prediction 205 236 - -
Mtr1g1737 289 ProSiteProfiles dnaJ domain profile. 38 103 IPR001623 -
Mtr1g1737 289 SMART dnaj_3 37 95 IPR001623 -
Mtr1g1737 289 MobiDBLite consensus disorder prediction 11 27 - -
Mtr1g1737 289 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 2 289 IPR042977 -
Mtr1g1737 289 PRINTS DnaJ domain signature 40 58 IPR001623 -
Mtr1g1737 289 PRINTS DnaJ domain signature 58 73 IPR001623 -
Mtr1g1737 289 PRINTS DnaJ domain signature 75 95 IPR001623 -
Mtr1g1737 289 PRINTS DnaJ domain signature 95 114 IPR001623 -
Mtr1g1737 289 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 2 289 - -
Mtr1g1737 289 SUPERFAMILY Chaperone J-domain 38 113 IPR036869 -
Mtr1g1737 289 Pfam DnaJ domain 39 100 IPR001623 -
Mtr1g1737 289 Gene3D DnaJ domain 21 115 IPR036869 -
Mtr1g1737 289 MobiDBLite consensus disorder prediction 1 39 - -
Mtr1g1737 289 MobiDBLite consensus disorder prediction 256 289 - -
Mtr1g1737 289 MobiDBLite consensus disorder prediction 262 279 - -
Mtr1g1737 289 CDD DnaJ 40 92 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1737 Mtr-Chr1 24522288 24526260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1737 29 100 C2H2 Transcription Factor Family AT1G74250 38.961 2.64e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1737 K09529 - gmx:100781463 443.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1737 1 24522288 24526260 Mtr1g1737 1 24522288 24526260 ECH
Mtr7g2674 7 43467974 43471604 Mtr1g1737 1 24522288 24526260 PCT