Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1736 ATGGAAAATTATGAAGTGATAGAGAAACTTGGTAGAGGTGCTTTAGGTGCAACTTTTCTTGTTCTTCACAAAACTGAAAGAAAGAGGTATGTGTTGAAGAAGATTAGATTGGCCAAGCATACAGAGAAGTCCAAATTGACAGCATACCAAGAGCTGGACCTGATCGCACAACTAAATTATCCTTATATTGTGGAGTACAAAGATGCTTGGGTGGAGAAGGAGGACTATATATACATTATAAGCGGCTATTGCGAAGGAGGTGACATGGCTGAGAATATAAAGAAAGCTCGGGGATCTTTCTTTCCAGAGGAGAAAGTCTGCAAATGGATGACTCAATTGTTGCTAGCTGTGGACTACCTGCACTCTAACCGCGTGCTCCACAGAGATCTTAAGTGTTCCAACATATTCCTCACCAAAGAAAATAACATTCGTTTAGGTGACTTTGGTCTTGCAAAGCTACTTGACACAGACGACCCTGCTTCTTCGGTTGTTGGAACTCTAAATTACATGTGTCCTGAGATCTTTTCTGATATGCCTTACGGTTATAAATCTGACATATGGTCGCTTGGTTGCTGCATGTTTGAAATTGTTGCACATCAACCGGCATTTCGTGCTCCAGACAGGGCTGGACTTATCAATAAAATAAATAGATCCACCATTTCTCCACTGCCAATTGTTTACTCTTCCACACTGAAACAAATTATCAAGAGCATGCTGAGGAAAAACCCTGAACACAGACCAACAGCGGCTGAATTGTTGAGGCATCCTCATTTACAACCTTTTGTTCTCCGCTCTCGTGATGCACCCTCTGTTTTTCTTCCGGTACATCTCATAAGTTGTAACTCACCGAAAAAATCTTACAAATCTAGTGGTGGCAAAGACAATAAGGACAAAGAAGAAGGATTTGTACACCATTTGGAGCGAGTTTATCCCATTGAGGGAAATGGAGACGTACAGACAAGAAATCGACCAAATGGTCGCAAGCTAGCAGTGTCAGTGAGCACAGAAGACAACCTTGAGACTAAAAGGGTTGATCCTACCAGCTACTCATTGGAATTCTCTACAAGTTTTAGTGGCTCAAAAGACGAGTCCACAACATCTGAATCAACCGTTTGCAGCGTGTGCAAGGAAGCAGACTTAAAAAATAGAGCTGTAAGAGACATGGATGATACAGAGATCACTTCAAAGAGTACCCTAGATTTTGCACATGAAAAACAAGTATTTGCAACTGAACATTTTCAGAAGTCGTATGCGGTTGACATAAATACAGGGACTAAAAAAGTCGAAGATACTTTTTCCAATGAAGACAGTAGTGGCAATGATAAAGATGCATCTACCAGTGACGATGTCACATCACAATGTACTCGAGATTCTGTGCACGTAGAAAAAAGATTTACTGTCGAACATTTTCTGAAGGCTGATTCAATTGACATAAATGCATTAACCACAGAAGATAGATACAAGTTTTCCAATAAAGGTTTTGATAAAGCTGAATTACAGAGAGAAGATGTGAAACCTGAGGACTTCATTAAATCAATAATGTCCAGTGAAAATAGATTGGGCATTGATATAGATGGGTCCATTGATGAGGTCACTTCAGAAAGTACACTAGAGTTTTTGCTTGTAGAACAATTTATTACTGAACATTGTCAGAATCCTAATGCATTTGATATAAATGCAGTGACAACAGAAGTTGAAGGTACTTTATCTGAAGGTTGTTTTGATACTTTTTCCGAATGTGATTTCGATGCTTTCTCCGAAACACAGAGAGAAGGCGCCAAAGCAGAGGACTCAAATAAATCAATCATTTACAGGAACGACTGTAATCGAAATGATAAAGAGCCCGTTGATGATATCACTTCAAAGAGCACACTTGATTCTGTACATGAAAAACAGGAATGTACCGCCGAGAATTGTCAGAACTCAAATACAATTTGCATAAATTCAGCGACTACAAAAGTTGATGATAGTCTTTCTAGTGAAGGTTTTGATAAAGCTGTAGCACGAAGAGAAGATGCCAAACCTGAGGACTCGAGTAATTCAATCATTTACATCAAAGACTGCAATGGAGATGATAAAGAACAGTCCATTGGTGATATCACTTCAAAGAGCACACTGGATTCTGTACTCGAAGAACAGGAACGTGCCGCTGAGAATTTTCCAAAGTCAAATACAATTGACATACATGCTGTGACTGCAAATGTTGATGATACTCTTTCCGGTAAAGTTTTTGATAAAGTTGAAGCTCAAACAGAGGATGTCAAACCTGAGGACTCAGGCATGTCAATCATTTACCGCAATATCAATGACGAAAAAGAGTCTATCGATGAGATCACATCAAAGAGCACAGGCGATTCTGTGCATGAAGAACAGCAATTTTCTGCTGAACACTTTCGTAATCCAGATACAATCGACACAAATGCAGTGACTACAAAAGTTGATGATACTTTTTCGAACGAAGGTTTTGATAAAGTTGAAGCCATAAGTGACAATGATAAAATTGGTTTCATCAACGAGGATATGGAATCACCGATTGTGCATTCTGTTAGGGTTGAACATGACCCTGATACTGTAAGCTGCACGAAGGAAAGTGAAAAACCTGAAGCATTCACAGAGGACTCACACATGAACATTCCGGCTTCTGAGAGCAATGATTCACTTCCAGCCAATTATGAAGGCAGTTTCACACATAAACACGATAAAAATGCCTCTGTTGATAAGACACCAAATGAAATTTCCTTAAGCACAAATATTTCACTAGGGGGTGACAAAACAAAGAGGTTGTTGAAAAATTCCGGCCAACAAAGAGCTGATGCTTTGGAGTCTCTGCTTGAGTTATGTGCACATTTACTTAAGCAAGGAAAACTGGAAGAGCTTGCTGCGGTGCTAAGACCGTTCGGAGAAGACACAGTTTCATCCAGAGAAACAGCTATATGGCTGACAAAAAGCCTCATGTCGTCGCAAAAATTTCATCCGGAAACCTAG 2985 0.3973 MENYEVIEKLGRGALGATFLVLHKTERKRYVLKKIRLAKHTEKSKLTAYQELDLIAQLNYPYIVEYKDAWVEKEDYIYIISGYCEGGDMAENIKKARGSFFPEEKVCKWMTQLLLAVDYLHSNRVLHRDLKCSNIFLTKENNIRLGDFGLAKLLDTDDPASSVVGTLNYMCPEIFSDMPYGYKSDIWSLGCCMFEIVAHQPAFRAPDRAGLINKINRSTISPLPIVYSSTLKQIIKSMLRKNPEHRPTAAELLRHPHLQPFVLRSRDAPSVFLPVHLISCNSPKKSYKSSGGKDNKDKEEGFVHHLERVYPIEGNGDVQTRNRPNGRKLAVSVSTEDNLETKRVDPTSYSLEFSTSFSGSKDESTTSESTVCSVCKEADLKNRAVRDMDDTEITSKSTLDFAHEKQVFATEHFQKSYAVDINTGTKKVEDTFSNEDSSGNDKDASTSDDVTSQCTRDSVHVEKRFTVEHFLKADSIDINALTTEDRYKFSNKGFDKAELQREDVKPEDFIKSIMSSENRLGIDIDGSIDEVTSESTLEFLLVEQFITEHCQNPNAFDINAVTTEVEGTLSEGCFDTFSECDFDAFSETQREGAKAEDSNKSIIYRNDCNRNDKEPVDDITSKSTLDSVHEKQECTAENCQNSNTICINSATTKVDDSLSSEGFDKAVARREDAKPEDSSNSIIYIKDCNGDDKEQSIGDITSKSTLDSVLEEQERAAENFPKSNTIDIHAVTANVDDTLSGKVFDKVEAQTEDVKPEDSGMSIIYRNINDEKESIDEITSKSTGDSVHEEQQFSAEHFRNPDTIDTNAVTTKVDDTFSNEGFDKVEAISDNDKIGFINEDMESPIVHSVRVEHDPDTVSCTKESEKPEAFTEDSHMNIPASESNDSLPANYEGSFTHKHDKNASVDKTPNEISLSTNISLGGDKTKRLLKNSGQQRADALESLLELCAHLLKQGKLEELAAVLRPFGEDTVSSRETAIWLTKSLMSSQKFHPET* 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1736 994 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1736 994 MobiDBLite consensus disorder prediction 315 343 - -
Mtr1g1736 994 CDD STKc_Nek 3 258 - -
Mtr1g1736 994 MobiDBLite consensus disorder prediction 429 443 - -
Mtr1g1736 994 SUPERFAMILY Protein kinase-like (PK-like) 1 282 IPR011009 -
Mtr1g1736 994 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 476 563 - -
Mtr1g1736 994 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 722 807 - -
Mtr1g1736 994 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 1 482 - -
Mtr1g1736 994 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 639 729 - -
Mtr1g1736 994 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 838 976 - -
Mtr1g1736 994 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 550 645 - -
Mtr1g1736 994 MobiDBLite consensus disorder prediction 318 337 - -
Mtr1g1736 994 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1736 994 MobiDBLite consensus disorder prediction 854 886 - -
Mtr1g1736 994 MobiDBLite consensus disorder prediction 429 451 - -
Mtr1g1736 994 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Mtr1g1736 994 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1736 994 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Mtr1g1736 994 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 639 729 - -
Mtr1g1736 994 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 482 - -
Mtr1g1736 994 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 722 807 - -
Mtr1g1736 994 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 838 976 - -
Mtr1g1736 994 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 476 563 - -
Mtr1g1736 994 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 550 645 - -
Mtr1g1736 994 MobiDBLite consensus disorder prediction 854 872 - -
Mtr1g1736 994 Gene3D Transferase(Phosphotransferase) domain 1 84 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1736 Mtr-Chr1 24509448 24533088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1736 4 259 MAP Kinase Kinase Kinase AT3G13530 32.296 7.81e-34 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Mtr1g1736 Pkinase 1.6e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1736 K08857 - gmx:100818558 1103.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1736 1 24509448 24533088 Mtr1g1736 1 24509448 24533088 ECH
Mtr7g2673 7 43460024 43466155 Mtr1g1736 1 24509448 24533088 PCT