Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr1g1716 | ATGGAGAAAATGGCACTTACTGTTCAAAACTCTCTATTATTCTCTTCAACAACATTTCCAAAGAAAAACTCTTCTTCTCCATTTTTCTTCAATAAACGTAACAAGCTCTTTGGACTTCCCTTATCTTCTTCCAAACCAACTCTTCGAATTGCTTCAAGGAACAATAAGGCAATTAAATGTTCAATTTCAGAAGTCACAGAGCCGAAAACTGAGGAGAAGAAGAAATTGATGAGAAGAGCAGATATTAGAAATATTGCAATTGTTGCTCATGTTGATCATGGTAAAACAACTCTCGTTGATGCTATGCTCAAACAAACTAAGGTGTTTCGTGATAATCAAACTGTACAAGAAAGGATAATGGACTCTAATGATTTGGAGCGTGAAAGAGGAATCACTATACTGAGTAAAAATACATCTGTGACTTATAAAGATGCCAAGATTAATATAATTGATACTCCAGGTCACTCTGATTTTGGGGGTGAAGTAGAGCGCATCTTGAATATGGTCGAAGGAATTCTTCTAGTGGTAGATTCTGTTGAAGGGCCAATGCCACAGACAAGATTTGTCTTAAAGAAGGCTTTAGAGTTTGGCCATGCAGTTGTTGTGGTTGTGAATAAAATAGACAGGTCTTCTGCTCGCCCTGATTTTGTCGTCAATTCTACTTTTGAACTCTTCATTGAACTAAATGCAACAGATGAACAGTGTGACTTTCAGGTTATATATGCAAGTGGTATAAAAGGGAAAGCAGGGTTGTCTCCTGAAGATCTGGCAGACGACCTTGGGCCATTATTTGAATCAATCATGAGATGTATCCCTGGACCGCGTATTGATAAAGATGGCTCACTCCAAATGCTTGTTACAAGTACCGAGTACGAGGGACATAAAGGACGTATAGCAATTGGGCGCTTGGAAGCTGGAGTTTTAGAAAAAGGCATGGAAGTCAAGGTTTGTACCTCAGAAGATTCATGTAGATATGCAAGAGTTAGTGAGCTTTATGTGTATGAAAAATTCTTTCGGGTCCCTGCTGAAAGGGTGGAGGCTGGGGATATATGTGCAGTATGTGGAATTTCTGATGTTCAGATTGGCGAGACAATTGCGGATAAATTGACTGGAAAGGCACTACCTTCCATCAAAGTAGAAGAACCAACAGTGAAAATGTCTTTCTCCATAAACACATCGCCTTTTGTTGGTCGTGAGGGAAAGTATGTTACCAGTAGGAATTTAAGGGACAGGCTTTATCGTGAACTTGAGCGAAATCTGGCTATGAAGGTTGAAGATGGTGAAACAGCCGATACATTCATTGTCAGTGGACGTGGAACACTGCATATCACTATACTCATTGAAAATATGCGAAGGGAAGGATATGAATTCATGGTTGGGCCTCCCAAAGTTATCAACAAGAAGGTTGATGACAAAGTGTTGGAGCCGTATGAGATTGCAACTGTGGAGGTACCGGAAGAGCATATGGGATCTGTTGTTGAACTTCTTGGCCAGAGACGAGGGCAAATGTTCGACATGCAAGGAGTTGGATCGGAGGGAACTAACCTACTCAAATATAAGATCCCAACCCGTGGCCTACTTGGATTGCGGAATGCAATTTTAACTGCTTCTCGAGGGACAGCTATCCTCAACACTATCTTCGATTCCTATGGGCCTTGGGCTGGTGACATGAGTACTCGGGATTTAGGCTCACTGGTTGCTTTCGAAAATGGAACAGTTACTTCTTATGCAGTCGCGAGTTCACAGGAGAGGGGGCAAATGTTTGTTGGTCCAGGAGCGGAAGTTTATAAAGGTCAAATTATTGGCATCCATCAACGCCCTGGGGACTTGTCCTTGAATGTTTGCAAGAAAAAAGCTGCAACGAACATACGTTCCAACAAGGAACAATCAGTGATTCTTGATACACCGTTGGATTACAGTTTGGATGACTGCATTGAATACATCCAAGAAGATGAACTAGTAGAGGTCACCCCCCAAAGTATAAGAATGCTGAAGAATCCAAAATTTGCAAAGAAAGGAAGGTAA | 2025 | 0.4123 | MEKMALTVQNSLLFSSTTFPKKNSSSPFFFNKRNKLFGLPLSSSKPTLRIASRNNKAIKCSISEVTEPKTEEKKKLMRRADIRNIAIVAHVDHGKTTLVDAMLKQTKVFRDNQTVQERIMDSNDLERERGITILSKNTSVTYKDAKINIIDTPGHSDFGGEVERILNMVEGILLVVDSVEGPMPQTRFVLKKALEFGHAVVVVVNKIDRSSARPDFVVNSTFELFIELNATDEQCDFQVIYASGIKGKAGLSPEDLADDLGPLFESIMRCIPGPRIDKDGSLQMLVTSTEYEGHKGRIAIGRLEAGVLEKGMEVKVCTSEDSCRYARVSELYVYEKFFRVPAERVEAGDICAVCGISDVQIGETIADKLTGKALPSIKVEEPTVKMSFSINTSPFVGREGKYVTSRNLRDRLYRELERNLAMKVEDGETADTFIVSGRGTLHITILIENMRREGYEFMVGPPKVINKKVDDKVLEPYEIATVEVPEEHMGSVVELLGQRRGQMFDMQGVGSEGTNLLKYKIPTRGLLGLRNAILTASRGTAILNTIFDSYGPWAGDMSTRDLGSLVAFENGTVTSYAVASSQERGQMFVGPGAEVYKGQIIGIHQRPGDLSLNVCKKKAATNIRSNKEQSVILDTPLDYSLDDCIEYIQEDELVEVTPQSIRMLKNPKFAKKGR* | 675 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr1g1716 | 674 | Pfam | Elongation factor Tu GTP binding domain | 81 | 272 | IPR000795 | GO:0003924|GO:0005525 | |
Mtr1g1716 | 674 | PANTHER | TRANSLATION ELONGATION FACTOR-RELATED | 67 | 674 | - | - | |
Mtr1g1716 | 674 | CDD | BipA_TypA_C | 475 | 554 | IPR035651 | - | |
Mtr1g1716 | 674 | Gene3D | - | 466 | 559 | - | - | |
Mtr1g1716 | 674 | Pfam | Elongation factor Tu domain 2 | 296 | 365 | IPR004161 | GO:0005525 | |
Mtr1g1716 | 674 | PANTHER | BNAC09G43450D PROTEIN | 67 | 674 | - | - | |
Mtr1g1716 | 674 | Gene3D | bipa protein | 560 | 639 | IPR042116 | - | |
Mtr1g1716 | 674 | CDD | BipA_III | 382 | 460 | - | - | |
Mtr1g1716 | 674 | ProSitePatterns | Translational (tr)-type guanine nucleotide-binding (G) domain signature. | 121 | 136 | IPR031157 | - | |
Mtr1g1716 | 674 | TIGRFAM | TypA_BipA: GTP-binding protein TypA/BipA | 82 | 668 | IPR006298 | GO:0005525 | |
Mtr1g1716 | 674 | CDD | BipA_TypA_II | 282 | 375 | - | - | |
Mtr1g1716 | 674 | PRINTS | GTP-binding elongation factor signature | 84 | 97 | IPR000795 | GO:0003924|GO:0005525 | |
Mtr1g1716 | 674 | PRINTS | GTP-binding elongation factor signature | 128 | 136 | IPR000795 | GO:0003924|GO:0005525 | |
Mtr1g1716 | 674 | PRINTS | GTP-binding elongation factor signature | 148 | 158 | IPR000795 | GO:0003924|GO:0005525 | |
Mtr1g1716 | 674 | PRINTS | GTP-binding elongation factor signature | 200 | 209 | IPR000795 | GO:0003924|GO:0005525 | |
Mtr1g1716 | 674 | Pfam | Elongation factor G C-terminus | 473 | 557 | IPR000640 | - | |
Mtr1g1716 | 674 | SUPERFAMILY | EF-G C-terminal domain-like | 380 | 464 | IPR035647 | - | |
Mtr1g1716 | 674 | TIGRFAM | small_GTP: small GTP-binding protein domain | 82 | 231 | IPR005225 | GO:0005525 | |
Mtr1g1716 | 674 | Gene3D | Elongation Factor G (Translational Gtpase), domain 3 | 383 | 666 | - | - | |
Mtr1g1716 | 674 | SUPERFAMILY | EF-G C-terminal domain-like | 475 | 590 | IPR035647 | - | |
Mtr1g1716 | 674 | SUPERFAMILY | Translation proteins | 228 | 371 | IPR009000 | - | |
Mtr1g1716 | 674 | ProSiteProfiles | Translational (tr)-type guanine nucleotide-binding (G) domain profile. | 80 | 275 | IPR000795 | GO:0003924|GO:0005525 | |
Mtr1g1716 | 674 | Gene3D | - | 79 | 275 | IPR027417 | - | |
Mtr1g1716 | 674 | SMART | EFG_C_a | 472 | 561 | IPR000640 | - | |
Mtr1g1716 | 674 | CDD | TypA_BipA | 81 | 274 | - | - | |
Mtr1g1716 | 674 | Gene3D | Translation factors | 276 | 376 | - | - | |
Mtr1g1716 | 674 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 67 | 283 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr1g1716 | Mtr-Chr1 | 23445886 | 23453537 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr1g1716 | 82 | 209 | Eukaryotic Initiation Factors Gene Family | AT3G22980 | 43.846 | 4.70e-24 | 106 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr1g1716 | K06207 | - | gmx:100785222 | 1137.48 |