Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1715 ATGGGAAATTGTTGTACAAATCCAATTACTAAACTAAGACGAAAGGAAAAGCCTAAAAAAGACCACGGGCCAACAACAAAGAACAAAACCAACAAAATCAAAAACACCTTGGTGGTGTTGAAAAAGCCCACGGGCCGAGAGATATTACAACAATACGAATTAGGGAGAGAATTAGGGAGAGGAGAATTTGGAATAACGTATTTATGTAAAGATAGAGAAACGGGAGAGGAATTAGCTTGTAAATCGATTTCAAAGGATAAGCTAAGAACAGCGATTGATATTGAAGATGTTAGAAGAGAGGTTGAAATTATGAGGCATTTACCTAAACATCCTAATATTGTTACGTTGAAGGATACTTATGAAGATGATGATAATGTTCATCTTGTTATGGAGCTTTGTGAAGGTGGTGAGCTTTTTGATCGGATTGTTGCTAAGGGACATTATACCGAACGCGCCGCCGCGACGGTGGTTAAGACCATCGTTCAAGTTGTTCAGATGTGCCACGAACATGGTGTGATGCATCGGGATCTCAAACCCGAGAACTTTTTGTTTGCAAACAAGAAGGAAACATCACCTTTGAAAGCTATTGACTTTGGTTTGTCAATTACCTTTAAACCAGGTGATAAATTTAACGAGATAGTTGGGAGTCCATATTACATGGCCCCTGAAGTATTGAAGAGAAATTATGGCCCTGAAATAGATATCTGGAGTGCCGGAGTAATTCTTTACATCTTACTTTGTGGTATCCCTCCTTTTTGGGCAGAAACTGAGCAGGGAATTGCTCAAGCAATTATACGATCCGTTATTGACTTTAAAAAGGAGCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTATTAAGAAGATGCTTGATCCTGACCCAAAGCGCCGGCTTACTGCACAGGAAGTGTTAGATCATCCATGGTTGCAGAATGCAAAGACAGCTCCTAATGTTTCATTGGGAGAAACAGTCAGAGCAAGGCTCATGCAATTTTCTGTAATGAACAAACTTAAGAAAACAGCATTGAGGATTATTGCAGACCATTTGTCTGTAGAAGAAGTTGCTGGAATAAAAGAGGGATTCCAGGTGATGGATACAGAAAATAAAGGCAAAATCAACCTTGATGAACTACGAGTAGGGCTGCTTAAGCTTGGCCACCAAATTCCTGAGGGAGATGTTCAAATACTGATGGAAGCTGGTGATGTCGACAAAGATGGTTTCCTAGATTATGGAGAGTTTGTAGCCATTTCTATTCATCTGAGAAAGATATCCCATGATGAACACCTCCAAAGAGCATTCCAATTTTTTGATAAAAACGAATCTGGGTTTATTGAACTTGAGGAGTTACGTAATGCCTTAGCTGATGAGGTTGACACGAACAGTGAAGAAGTCATTAATGCAATTATGCATGATGTGGACACAGATAAGGATGGAAAAATAAGTTATGAGGAATTTGCTACGATGATGAAGGCTGGCACAGATTGGAGAAAAGCATCAAGGCAGTATTCGAGAGAGAGGTTTACCAGTCTCAGTATTAAACTGATGAAGGAGGGATCATTAGAATTGAACAATGAGGGTAGATGA 1587 0.3963 MGNCCTNPITKLRRKEKPKKDHGPTTKNKTNKIKNTLVVLKKPTGREILQQYELGRELGRGEFGITYLCKDRETGEELACKSISKDKLRTAIDIEDVRREVEIMRHLPKHPNIVTLKDTYEDDDNVHLVMELCEGGELFDRIVAKGHYTERAAATVVKTIVQVVQMCHEHGVMHRDLKPENFLFANKKETSPLKAIDFGLSITFKPGDKFNEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGIPPFWAETEQGIAQAIIRSVIDFKKEPWPKVSDNAKDLIKKMLDPDPKRRLTAQEVLDHPWLQNAKTAPNVSLGETVRARLMQFSVMNKLKKTALRIIADHLSVEEVAGIKEGFQVMDTENKGKINLDELRVGLLKLGHQIPEGDVQILMEAGDVDKDGFLDYGEFVAISIHLRKISHDEHLQRAFQFFDKNESGFIELEELRNALADEVDTNSEEVINAIMHDVDTDKDGKISYEEFATMMKAGTDWRKASRQYSRERFTSLSIKLMKEGSLELNNEGR* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1715 528 SMART serkin_6 52 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1715 528 Pfam EF-hand domain pair 428 491 IPR002048 GO:0005509
Mtr1g1715 528 Gene3D Phosphorylase Kinase; domain 1 54 137 - -
Mtr1g1715 528 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
Mtr1g1715 528 ProSitePatterns EF-hand calcium-binding domain. 438 450 IPR018247 -
Mtr1g1715 528 MobiDBLite consensus disorder prediction 1 32 - -
Mtr1g1715 528 SUPERFAMILY Protein kinase-like (PK-like) 48 320 IPR011009 -
Mtr1g1715 528 CDD STKc_CAMK 51 309 - -
Mtr1g1715 528 Pfam Protein kinase domain 52 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1715 528 SMART efh_1 429 457 IPR002048 GO:0005509
Mtr1g1715 528 SMART efh_1 357 385 IPR002048 GO:0005509
Mtr1g1715 528 SMART efh_1 465 493 IPR002048 GO:0005509
Mtr1g1715 528 SMART efh_1 393 421 IPR002048 GO:0005509
Mtr1g1715 528 ProSiteProfiles EF-hand calcium-binding domain profile. 353 388 IPR002048 GO:0005509
Mtr1g1715 528 PANTHER SERINE/THREONINE-PROTEIN KINASE 13 507 - -
Mtr1g1715 528 ProSiteProfiles EF-hand calcium-binding domain profile. 425 460 IPR002048 GO:0005509
Mtr1g1715 528 ProSitePatterns EF-hand calcium-binding domain. 474 486 IPR018247 -
Mtr1g1715 528 ProSiteProfiles Protein kinase domain profile. 52 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1715 528 ProSiteProfiles EF-hand calcium-binding domain profile. 461 496 IPR002048 GO:0005509
Mtr1g1715 528 Pfam EF-hand domain pair 384 416 IPR002048 GO:0005509
Mtr1g1715 528 CDD EFh 429 491 IPR002048 GO:0005509
Mtr1g1715 528 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 8 13 507 - -
Mtr1g1715 528 Gene3D Transferase(Phosphotransferase) domain 1 138 318 - -
Mtr1g1715 528 MobiDBLite consensus disorder prediction 10 28 - -
Mtr1g1715 528 SUPERFAMILY EF-hand 334 503 IPR011992 -
Mtr1g1715 528 ProSitePatterns EF-hand calcium-binding domain. 402 414 IPR018247 -
Mtr1g1715 528 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Mtr1g1715 528 Gene3D - 319 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1715 Mtr-Chr1 23438911 23443356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1715 1 526 EF-hand Containing Proteins AT5G19450 74.345 0.0 839
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr1g1715 Pkinase 3.2e-79 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1715 K13412 - gmx:100815320 885.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1715 1 23438911 23443356 Mtr1g1715 1 23438911 23443356 ECH
Mtr7g2655 7 43247300 43251237 Mtr1g1715 1 23438911 23443356 PCT