Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1711 ATGTTTGGGAGAAAAGCTTGCCAACTTGTGAAAGAATTTGCGAGTGGAGAAAAGGGTCAGCTCACACCATTTAATAAAGACTTGTTTGAGCAAGTAGTTGGAGAATGCAACCAACATCACCTTGACCTTCAGTCCTTGATAAGGAAGATGCAGGAAGAAGGTTTGGATGTCCAAACTGCTAGAAATGCTGACCACTACGGAGCCCTCATCCACCTATTTTCTATAGTCCGAAATAAACGTTGTCTAATGGCCTATGTGTATAATCGAGCAGAAACTATACGGAGCTTGTTATGGAAGATAGGGCCTGTGATTCCTAAAGAAATTGAAGAGAAGCTTGATCATAGGGAGGAAGAGTATTTCAAGAAGCATTCTTCAGCATTGAAATCTTATATGTCAAAAGTGTTTGTTGATCTGACTGTGGATATGGTACCACCAAAAGATCCATACATCCAAGTAAGGGTCCTTGAAGACATAAGAGAAGGCATTGTGCTTAGTGATGATAAGAATCCCAATTTCGCCCGACATTCAATGCATTTTCTGAAACGAACTGATGCTGAGAAATATATCTCACGGGGCTTAATGGAGGAGCTCACTGGTTGA 600 0.41 MFGRKACQLVKEFASGEKGQLTPFNKDLFEQVVGECNQHHLDLQSLIRKMQEEGLDVQTARNADHYGALIHLFSIVRNKRCLMAYVYNRAETIRSLLWKIGPVIPKEIEEKLDHREEEYFKKHSSALKSYMSKVFVDLTVDMVPPKDPYIQVRVLEDIREGIVLSDDKNPNFARHSMHFLKRTDAEKYISRGLMEELTG* 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1711 199 SUPERFAMILY GINS helical bundle-like 1 146 IPR036224 -
Mtr1g1711 199 Gene3D - 1 134 - -
Mtr1g1711 199 Pfam GINS complex protein 44 116 IPR021151 -
Mtr1g1711 199 CDD GINS_A_psf1 3 134 IPR005339 GO:0000811|GO:0006260
Mtr1g1711 199 PANTHER PARTNER OF SLD5 1 195 IPR005339 GO:0000811|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1711 Mtr-Chr1 23409678 23413792 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1711 1 199 Core DNA Replication Machinery Family AT1G80190 69.307 8.95e-103 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1711 K10732 - qsu:112021696 334.724