Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1677 ATGAGAGTTGTAAAGCATGATTCAAGACCTCATAAGCTTCAGAAAACTGGAGTGTGTGAGAAAAAGGCCGTGACTAGGTTTGGAGCCGAGGCCCTTCATATTAAGAGTGTTTTGTTGCGAGCGAAAAAGCATAACCACCAGCATCATCCAAAGCTTGCTTCTCCTTTGAAGAGTCCTAGAATTACTTCTGGAAAAAGTGCTTCTCGAAGCTCTAGGTTAATGGGAGTTGCTGCTAAGATTTTGGAACCCGGATTGCAGGCAAGTAGAGGTAAAGGCACTCTGACGTATCATGCTTCCGCTTGTCCTCTCAAGGGTGGCATTGTAAAAGGTGGTGTAGGAAATGCGATAATGCCAAATCATTCCTGTTACGTTTCCAGCGCATCCAAAACTTCAATGGGGCAGACTTCTTGCAAGAATTGTGGCAATTTGCTTGATGTAATTGACTGCAAGGCCGAGGTTAGGGGACCACTTGATGTTCCCCCACCTACTGTTTCAGCTGTGATCACTGCTACCTCGATGGTATCGTCGTGTAAGAAGGGAATGCCGATTACTCCCTTTCATGGACAAGGAAGAGATATTGTACTTCTGAGAAGTCAGGAAAAATTCGCATCTCATGTTACGGATGGGGAGGAGGAAAATTATGCACAACAGTCGTGGAATGAAACGACTACCATAAGAATTCCAATGCCCCGCGAAGGTCCGGCTCAATGGAGTTCGAATTCATCATGCCGACCAATAAGGGCCCAAGAGGATGATGCATCTTCTTTTGCCTACAAACGCAAAGCACAAGAATCGAAATTAAGCAGTGAAAGCTCTTCATCTGGATCTAGAATGTGTAGTATGCAAGTAAAAAGAGTATCATCGTGTGCAAACACTACAAGTGGGACTAAAGACTTTGTTGCTTTGAATAGAAGCATCATTGGTCAAACGAGGATGAGGTCGCCTACTAAAGTTGACAGTTCCAAATTTGACTTATCACATAAGTATGGTTTAATGGTTTTGATAGTGTTGTATGTAAAACTAAGATAA 1029 0.4325 MRVVKHDSRPHKLQKTGVCEKKAVTRFGAEALHIKSVLLRAKKHNHQHHPKLASPLKSPRITSGKSASRSSRLMGVAAKILEPGLQASRGKGTLTYHASACPLKGGIVKGGVGNAIMPNHSCYVSSASKTSMGQTSCKNCGNLLDVIDCKAEVRGPLDVPPPTVSAVITATSMVSSCKKGMPITPFHGQGRDIVLLRSQEKFASHVTDGEEENYAQQSWNETTTIRIPMPREGPAQWSSNSSCRPIRAQEDDASSFAYKRKAQESKLSSESSSSGSRMCSMQVKRVSSCANTTSGTKDFVALNRSIIGQTRMRSPTKVDSSKFDLSHKYGLMVLIVLYVKLR* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1677 342 PANTHER DNAA INITIATOR-ASSOCIATING PROTEIN 1 328 - -
Mtr1g1677 342 MobiDBLite consensus disorder prediction 44 70 - -
Mtr1g1677 342 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 328 - -
Mtr1g1677 342 MobiDBLite consensus disorder prediction 257 276 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1677 Mtr-Chr1 22168764 22170446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1677 9 146 TRM (TON1 Recruiting Motif) Superfamily AT1G67040 44.295 4.38e-21 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1677 - - mtr:MTR_4g008820 656.366