Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1676 ATGTTCCTCAAGCTTGTGTTTATGTTGTTTAATCTTGTTACATTGGTAGCAAGTGAAGATAACAGTTTCATCTATAATGGATTCCAATCATCACATTTATATCTTGATGGTATTGCTGAGTTAACCTCAAATGGCTTACTAAGACTCACTAGTGATACAGATCATGAAATAGGGCATGCTTTCTATCCAAATCCTATAGTTTTCGAAAACACTTCCGGCGAAAGTGTGTTTTCTTTTTCAACTACTTTTGTATTTGCCATAAGACCTCAATATCCAACTCTTGGTGGCCATGGAATTGTTTTTGTTATTTCTCCTACAAAAGAGCTACCAAATTCACTACCAACACAATACCTTGGTCTCTTTAACAATTCCAACAATGGAAACAGTAGCAACCATGTTTTTGGTGTTGAGCTTGACACTGTTCAAGATTTTGAGTTTGATGATATCAATAATAACCATGTTGGTATTGATATCAATGATTTGAAATCAGCTAACTCAACTTCTGCAGGCTATTATGATGATAATGATGGATTCAATGATTTATCCCTTTTCAGTGGATATCCTATGCATGTATGGATTGAATATGATGGTGAAAAGAAGAAGATTAATGTTACTTTAGCTCCAATTAGTGTTGGTTTTAATAAAAAACCAGCAAGACCTTTGTTATCATTGACCAAAGATCTTTCTCCAGTTCTCAACAATAGTATGTATGTTGGATTCTCATCTTCAACAGGGTTACTTGCAGCTTCTCATTATATTCTTGGTTGGAGTTTTAAGGTTAATGGCCTGGCTCAAAACCTTGAAATCTCTGAACTTCCTGAAGTAACAGTATTTTCTGAGAAAAAAAAATCCAAATTTTTAACTATTAGTTTGCCTTTGATTTTGCTTAGTTTGGTATTCATGATAACTTTAGGGGTTATGTATTATATCAAACGGAAGAAGTTTTCTGAGATTCTTGAAGATTGGGAACATGAATATGGCCCACATAGATTTAAGTTCAAAGATCTATATTTTGCTACAAAAGGTTTCGGGGAAAAGGGTCTACTGGGAGTTGGTGGATTTGGTAGAGTCTACAAAGGTGTGATACCGAGTTCCAAACTTGAAGTTGCTGTGAAAAGGGTGTCTCATGAATCAAGACAAGGGATAAGGGAATTCGTGTCGGAAATTGTTAGTATTGGTCGTCTTCGGCACAGGAATCTTGTTCAACTTTATGGCTATTGCAGGCGAAAAAGCGAGTTACTTTTGGTTTATGATTACATGCCAAATGGAAGTTTAGACAACTATCTATACAACCAACCAAAAGCGAGGTTGAATTGGAGTCAAAGATTTAGAATCATCAAAGGTGTTGCTTCAAGTGTGGTTTATCTACATGAAGAATGGGAGAAAGTTGTAATTCATAGAGACATAAAAGCTAGTAATGTGTTGTTAGATTCTGAATTTAATGCTAGATTGGGAGATTTTGGTCTTTCAAGGTTGTATGATCATGGTGCAGATCCTCACACAACTCATTTGGCTGGAACTATTGGTTATCTTGCTCCGGAACATATTAGAACAGGTAAGGCTACTAAATCTTCTGATGTGTTTTCTTTTGGTGCATTTCTTCTTGAGGTTGTTTGTGGTAGGAGGCCTATAGGTCATGTCGGAGACAACGAGAGTCTAATTCTAGTTGATTATGTGTTTGAATGTTGGAAAAGAGGTGAAATTCTTGAGGCAAAAGATGCATATTTAGGAACAAAATATGTGTCTGAAGAGGTGGAATTGGTGTTGAAACTTGGCTTGTTGTGTTCACATTCCGAGCCTTTGGCTAGACCAAGTATGAGGCAAGTTGTGCAGTATTTGGAGAGGGATATACCTTTGCCAGATTTGTCTTCACTTAGTTTATCTTCTTCTGGTTTATCTTCTGTGTCTATTGCTGAATCTGTTCTCTCTGGTGGTTGA 1938 0.3638 MFLKLVFMLFNLVTLVASEDNSFIYNGFQSSHLYLDGIAELTSNGLLRLTSDTDHEIGHAFYPNPIVFENTSGESVFSFSTTFVFAIRPQYPTLGGHGIVFVISPTKELPNSLPTQYLGLFNNSNNGNSSNHVFGVELDTVQDFEFDDINNNHVGIDINDLKSANSTSAGYYDDNDGFNDLSLFSGYPMHVWIEYDGEKKKINVTLAPISVGFNKKPARPLLSLTKDLSPVLNNSMYVGFSSSTGLLAASHYILGWSFKVNGLAQNLEISELPEVTVFSEKKKSKFLTISLPLILLSLVFMITLGVMYYIKRKKFSEILEDWEHEYGPHRFKFKDLYFATKGFGEKGLLGVGGFGRVYKGVIPSSKLEVAVKRVSHESRQGIREFVSEIVSIGRLRHRNLVQLYGYCRRKSELLLVYDYMPNGSLDNYLYNQPKARLNWSQRFRIIKGVASSVVYLHEEWEKVVIHRDIKASNVLLDSEFNARLGDFGLSRLYDHGADPHTTHLAGTIGYLAPEHIRTGKATKSSDVFSFGAFLLEVVCGRRPIGHVGDNESLILVDYVFECWKRGEILEAKDAYLGTKYVSEEVELVLKLGLLCSHSEPLARPSMRQVVQYLERDIPLPDLSSLSLSSSGLSSVSIAESVLSGG* 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1676 645 CDD STKc_IRAK 349 615 - -
Mtr1g1676 645 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 278 IPR013320 -
Mtr1g1676 645 CDD lectin_legume_LecRK_Arcelin_ConA 22 262 IPR001220 GO:0030246
Mtr1g1676 645 SMART serkin_6 343 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1676 645 Pfam Legume lectin domain 21 273 IPR001220 GO:0030246
Mtr1g1676 645 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Mtr1g1676 645 Pfam Protein kinase domain 345 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1676 645 Gene3D Transferase(Phosphotransferase) domain 1 420 627 - -
Mtr1g1676 645 SUPERFAMILY Protein kinase-like (PK-like) 317 614 IPR011009 -
Mtr1g1676 645 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
Mtr1g1676 645 Gene3D - 19 278 - -
Mtr1g1676 645 PANTHER - 3 633 - -
Mtr1g1676 645 ProSiteProfiles Protein kinase domain profile. 343 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1676 645 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKE 3 633 - -
Mtr1g1676 645 Gene3D Phosphorylase Kinase; domain 1 328 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1676 Mtr-Chr1 22140357 22142296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1676 13 645 Receptor kinase-like Gene Family AT3G53810 57.164 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr1g1676 Pkinase 4.1e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1676 - - gmx:100802293 892.493