Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1673 ATGGCTTCTTCTTCATCATCTTTTGGTGTTTCTCATTCAAGCTCAAAGCAGCATAATGTCTTTCTCAGCTTTAGAGGAGAAGATACTCGATACAATTTTACAAGCCATCTATATGCTGCCTTGTGTGGAAAAAAGATCCGTACATTCGTGGATGATGAGGAAATTGAGAGAGGAGATAACATCTCACCAACGCTTTTATCAGCTATTGAAAGCTCGAAGATTTGCGTAATAATTTTCTCGCAGGATTATGCGTCTTCTTCATGGTGTTTGGATGAACTTGTGAAAATCATTGAATGCAGTGAGAAGAAAAAACTTGTTGTCATACCTGTTTTCTATCACATCGATGCATCTCATGTAAGACACCAGAGGGGAACCTATGGAGATGCATTTGCCAAACACGAGGATCGTTTCAGGGACAATCTAACCAAGGTACACATGTGGAGAACTGCCCTGCACAAAGCTGCAAACTTAGCAGGATGGGTTTCCGAGAAAAATAGGTCCGAGGCTGTCCTAATTAAAGAAATTGTTGAAGTTATATTAGACAAGTTGAAATGTATGAGCCCACATGTTCAAAACAAGGGGCTTGTTGGAATTTCTGTACACGTTGCGCATGTGGAATCAATGTTATGCTCTGGGTCAGCTGATGTGCATATTATTGGTATTTGGGGTATGGGTGGCATAGGCAAGACAACCATTGCAGATGCTGTGTTTACAAAAGTCTCATATCAATACGAGAGATACTACTTTGCTGCCAATGTCAGGGAAACATGGGGAAATCGGATAAAGTTGCAGAATGAAGTTTTGGCGGACGTGTTAGAAGACCAAAGCATCAAGATTAGTACCCCTACAATGAGTTCCGCCTTTGCTGTAGAAAGACTTAAATGTAAAAAGGTCCTCGTCGTTCTTGATGACGTGAGTTTATCCGAACAAATAGAATATCTTGTTGGAGGGAGAGATTGGTTTGGACCTGGTAGTCGAATCATAGTGACCACTCGAAACAGAGAAGTGTTTAACAGTGGAGTCGATGAAGTATACCAAGTGACGGTATTGAATTCTCATGAAGCCCTAAAGCTTTTTAGCTTGAACGCCTTTCAACAAGACAGTCCATTGATCGAATACCAAAACTTGTCAGAAAGGGCAGTGGGTTATGCTAAGGGCATTCCTCTAGCTCTTAAAGTTATGCTAAGTGCATTGGAAAAGCTGAAGAAATATCCAAAAGCTGAAATTTATGATGTGTTGAGATTGAGTTATGAAGGATTGGACCCTGAGGAGCAGAATATATTTTTAGATATTGCCTGCTGTTTGAAAGGACAAACAAAAAGCCAAATAACAAGTATATTAGATGCATGTGATTTTTCTACTGAAATTGGGATGAGAAGCCTTGAAGACAAGTCTCTTGTAACTGTTTCTAAAAACAACACAGTACAGATGCATGATTTGATACAAGAAATGGGACGTTTTGTAGAATCTGAGAAAAAGCCTGGAGAAAGAAAACGGTTGTGGGATCCTAAAGAAATTTATGATGTCTTCAAGCATAACAGGGGTTTTGAAAGTATTGAGTGTGTTGTGTTGGACATGTCTCAAATCAAAGAGTTGACATTAAGCCCTCAAACATTTCAGAGAACGCACAGGCTCAGAGTTTTGATATTTTATATACCCTCCAGTGATACGAGAAGAATCAATGTGCATATTTCCAGAGGTCTCAATTGCATGCCTCTCGAAATAAGTTATTTCAGATGGGACTGTTTTCCATTGAAATCCTTGCCACCACAGTTTTGTGCGGAGAAGCTTGTCGAACTTGATATAAAACATAGCCGAATTGGAAAGCTTTGGGATGGAGTACAGGATCTTGTGAATTTGAAGTCATTATGCCTAAGTGGTTGCAAGAACTTGGTTGAGCTCTCAGATTTGTCTTTGGCCTCGAAACTTGAGAAAGTACATCTTGATGATTGTGCGAGCTTGTTGAATGTTCCTTCATACATTTTGTCACTTGATAGTCTGCTTGCACTAAATCTGAGAGGCTGTAAACAGCTCTGTTACATTGAAAGTGAGAAGCCATCTAGATCTCTTCGATGGCTTAATTTGAGAGGGTGCTCAAGACTTGTAAGGTATTCAGTTTTTTCCGAGGAACTGGAGTACTTGAACTTGGATTTCACGGCAATTGAAGAACTTCCTCACAACCTCAACCTCTTACCAAAGTTAAAAAAAACTATCATTAAGAGGAAGTGA 2229 0.397 MASSSSSFGVSHSSSKQHNVFLSFRGEDTRYNFTSHLYAALCGKKIRTFVDDEEIERGDNISPTLLSAIESSKICVIIFSQDYASSSWCLDELVKIIECSEKKKLVVIPVFYHIDASHVRHQRGTYGDAFAKHEDRFRDNLTKVHMWRTALHKAANLAGWVSEKNRSEAVLIKEIVEVILDKLKCMSPHVQNKGLVGISVHVAHVESMLCSGSADVHIIGIWGMGGIGKTTIADAVFTKVSYQYERYYFAANVRETWGNRIKLQNEVLADVLEDQSIKISTPTMSSAFAVERLKCKKVLVVLDDVSLSEQIEYLVGGRDWFGPGSRIIVTTRNREVFNSGVDEVYQVTVLNSHEALKLFSLNAFQQDSPLIEYQNLSERAVGYAKGIPLALKVMLSALEKLKKYPKAEIYDVLRLSYEGLDPEEQNIFLDIACCLKGQTKSQITSILDACDFSTEIGMRSLEDKSLVTVSKNNTVQMHDLIQEMGRFVESEKKPGERKRLWDPKEIYDVFKHNRGFESIECVVLDMSQIKELTLSPQTFQRTHRLRVLIFYIPSSDTRRINVHISRGLNCMPLEISYFRWDCFPLKSLPPQFCAEKLVELDIKHSRIGKLWDGVQDLVNLKSLCLSGCKNLVELSDLSLASKLEKVHLDDCASLLNVPSYILSLDSLLALNLRGCKQLCYIESEKPSRSLRWLNLRGCSRLVRYSVFSEELEYLNLDFTAIEELPHNLNLLPKLKKTIIKRK* 743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1673 742 Gene3D - 187 349 IPR027417 -
Mtr1g1673 742 Pfam NB-ARC domain 201 402 IPR002182 GO:0043531
Mtr1g1673 742 Gene3D - 350 421 IPR042197 -
Mtr1g1673 742 PRINTS Disease resistance protein signature 218 233 - -
Mtr1g1673 742 PRINTS Disease resistance protein signature 292 306 - -
Mtr1g1673 742 PRINTS Disease resistance protein signature 384 398 - -
Mtr1g1673 742 PRINTS Disease resistance protein signature 615 631 - -
Mtr1g1673 742 SUPERFAMILY Toll/Interleukin receptor TIR domain 12 160 IPR035897 -
Mtr1g1673 742 Gene3D - 11 186 IPR035897 -
Mtr1g1673 742 Gene3D Ribonuclease Inhibitor 500 741 IPR032675 -
Mtr1g1673 742 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 735 IPR044974 GO:0006952
Mtr1g1673 742 SUPERFAMILY "Winged helix" DNA-binding domain 408 510 IPR036390 -
Mtr1g1673 742 SMART till_3 17 157 IPR000157 GO:0007165
Mtr1g1673 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 431 IPR027417 -
Mtr1g1673 742 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 735 - -
Mtr1g1673 742 SUPERFAMILY L domain-like 520 736 - -
Mtr1g1673 742 Pfam TIR domain 18 197 IPR000157 GO:0007165
Mtr1g1673 742 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1673 Mtr-Chr1 22035744 22039249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1673 13 734 WRKY Transcription Factor Family AT4G12020 33.600 3.99e-99 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1673 - - mtr:MTR_1g052170 1393.64