Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1671 ATGGCTTCTTCTTCATCATCTTTTGGTGCTTCTCATTCAAACTCAAAGCAGCATCATGTTTTTCTTAACTTTAGAGGGGAAGATACTCGATACAATTTTACAAGCCATCTATATGCTGCCTTGTGTGGAAAAAAGATCCACACATTCATGGATGATGAGGAAATTGAGAGAGGAGATAACATCTCACCAACGCTTTTATCAGCTATTGAAAGCTCGAAGATTTGCGTAATAATTTTCTCGCAGGATTATGCGTCTTCTTCATGGTGTTTGGATGAACTTGTGAAGATCATTGAATGCAGTGAGAAGAAAAAACTTGTTGTCATACCTGTTTTCTATCACATCGATGCATCTCATGTAAGACACCAGAGGGGAACCTATGGAGATGCATTTGCCAAACACGAGGATCGTTTCAGGGACAATCTAACCAAGGTACACATGTGGAGAACTGCCCTGCACAAAGCTGCAAACTTAGCAGGATGGGTTTCCGAGAAAAATAGGTCCGAGGCTGTCGTAATTAAAGAAATTGTTGAAGATATATTGGACAAGTTGAAATGTATGATCCCACATGTTCAAAAGAAAGGACTTGTTGGAATTTCTCGACACATTGCGCATGTGGAATCAATGTTATGCTCTGGGTCAGCTGATGTGCATATTATTGGTATTTGGGGTATGGGTGGCATAGGCAAGACAACCATTGCAGATGCTGTGTTTACAAAAGTCTCATATCAATACGAGGGATACTACTTTGCTGCCAATGTCAGGGAAAAATGGGGAAATCGGATAAAGTTGCGGAATGAAGTTCTGGCGGACGTGTTAGGGGACCAAAGCATCAATATTAGTACCCCTACAATGAGTTCCGCCTTTGCTGTAGAAAGACTTAAATGTAAAAAGGTCCTCGTCGTTCTTGATGACGTGAGTTTATCAGAACAAATAGAATATCTTGTTGGAGGGAGAGATTGGTTTGGACCTGGTAGTCGAATCATAGTGACCACTCGAAACAAAGAAGTGTTTAACAGTGGAGTCGATGAAGTATACCAAGTGACGGTATTTAATTCTCATGAAGCCCTAAAGCTTTTTAGCTTGAACGCCTTTCAACAAGACAGTCCATTGATCGAATACCAACACTTGTCAGAAAGGGCAGTGGGTTATGCTAAGGGCATTCCTCTAGCTCTTAAAGTTCTGGGCTCACATCTTCGTTCCAAACGACCAAAAGAATGGGTGAGTGCATTGGAAAAGCTGAAGAAATATCCAAAAGCTGAAATTTATGATGTGTTGAGATTGAGTTATGAAGGATTGGACCCTGAGGAGCAGAGTATATTTTTAGATATTGCCTGCTGTTTGAAAGGACAAACAAAAAGCCAAATAACAAGTATATTAGATGCATGTGATTTTTCTACTGAAATTGGGATGAGAAGCCTTGAAGACAAGTCTCTTGTAACTGTTTCTAAAAACAACACAGTACAGATGCATGATTTGATACAAGAAATGGGACGTTTTGTAGAATCTGAGAAAAAGCCTGGAGAAAGAAAACGGTTGTGGGATCCTAAAGAAATTTATGATGTCTTCAAGCATAACAAGGGTATTGAAAGTATTGAGTGTGTTGTGTTGGACATGTCTCAAATCAAAGAGTTGACATTAAGCCCTCAAACATTTCAGAGAACGCACAGGCTCAGAGTTTTGATATTTTATATACCCTCCAGTGATACGAGAAGAATCAATGTGCATATTTCCAGAGGTCTCAATTGCATGCCTCTCGAAATAAGTTATTTCAGATGGGACTGTTTTCCATTGAAATCCTTGCCACCACAGTTTTGTGCGGAGAAGCTTGTCGAACTTGATATAAAACATAGCCGAATTGGAAAGCTTTGGGATGGAGTACAGGATCTTGTGAATTTGAAGTCATTATGCCTAAGTGGTTGCAAGAACTTGGTTGAGCTCTCAGATTTGTCTTTGGCCTCGAAACTTGAGAAAGTACATCTTGATGATTGTGCGAGCTTGTTGAATGTTCCTTCATACATTTTGTCACTTGATAGTCTGCTTGCACTAAATCTGAGAGACTGTAAACAGCTCTGTTACATTGAAAGTGAGAAGCCATCTAGATCTCTTCGATGGCTTAATTTGAGAGGGTGCTCAAGACTTGTAAGGTATTCAGTTTTTTCCGAGGAACTGGAGTACTTGAACTTGGATTTCACGGCAATTGAAGAACTTCCTCACAACCTCAACCTCTTACCAAAGTTAAAAAAACTATCATTAAGAGGAAGTGATATTGAGATATTGCCTGCTAGCATACAACATCTCTCCTTGTTGAGAGCTCTCGATGTAAGTAACTGCAGGAGGTTTCGTTCCATGCCCAAACTCCCATTATTGCTACAAGACTTGAATGCAAGCAATTGCATATCCCTAGAAACAGTTTCAAATTCAGGGATCACAATGTTGCAAGATTCTTTTGGTAAGCTAAACAAGAGAACATTGTTGACACAGATTCACAAGGAAGAACAAATGTCTATTCGTCATCGTGACTATTTGGGTAGATTTGAGTTTCATAATTGCATAAAGTTGGATCAGATTGCACGCATGACTGTTATGGAGGAGGCACTAATTAGAATTCAGCTAGCAGCTTACTTGTCATCAAAGATTCAAGTGTTTTCTGATCCTTATTGTCAAGCTGATGATAAAGTTTCAAAGAATTTTGACCATGAGGATTTTCTATATGTATCCCGGCCCTTTTATAGTATTTTACTGGGAAATAAAGTGCCAGATTGGTTCCTGCATAAAGAAACAAACTCCTTGTTCATCACTATTGAATTTTCTGAACGATGGAATTTACTGTGCAGATGCCGGGGGTTTGCCTTCTGCCTTGTTCTTGGAGCATCCGAATCAAACAAGAACATTCGTCGTACTGGTCTTATTGCAGGGTGTAGATACAATTTTGGAGGCAAATATAAAGGAACATCCATTTTGAAGTCTTCTTATAGTGATGCTAAGTCAGACCAGGTATGGCTTTGGTATGACCAAATTTTAGAAGTTGCAGATTTCCCAAGGACATTACCATGGAAGGTCTGCTTTGAGTTTTTTGTTCGGTCGGGTTGTTCAGGGTCTATAGTGAAACAGTGTGGAATTCAACCATTGTATGCTCCATTCGACATCATGCAAAGCTCACATGAAGAAGTTAATAGAGAAGGTAAGATGCCTTACCATGAGCTTGAATACAAAAAAGATCCAGGAAATTACTGGCTTCTTCGCCACTATGCTCACCCTCCTGATGGCCTTGGATTTCCATCAAAACAACAAAGGATTTCTGGGTGTCATGATGGACATATTATGGAACCCATTCCATCTACTTATTGTGCCAGGAAGGTTGATCATATTCATATGGAACACAATCATGCTGAAGTATTTGTTAATTTTGGTCTTATTCGTAGTGGTTACCACCAACCACGCGATCTGCAGTGTTTAGCCCAAATGCTTCTGGATAACTATTGTTATTACGGTAAACTTGTAGATAATATCGATATCTTTTCATCCCTAGGGAGATTGTCGCTAAGTGATTGCAATGTTGAGAGCTTTCCTTCTAGAATTGCAAACCTTTCAAGGCTGAAAGACCTTCGAATAAGAAACTGCAAGAGCCTTAGGTCTCTGTCCAAACTTCCACTATCCCTTCAATTTTTGTATGTCAAAGGGTGCACATCTCTGAAGACGGTTGGATTTGCTGAGGAATACTTCATGAGAGTTGATGTAATTGTTCGCGGTGAACGGATAACTAGGGTCATTGAAGTGGAAAAAGTGTCGAGAATACAAGTTACCGACCCATTAGCAAATGCCAGGAGCTGGACCATGCTCAAGTTTGGGTCTTCGATGGTCATTGAGTTCCATGTTGCTTCAATTTTAGAGTTATTGAATGTTGAGAGACGTGACTGCTGTACAATAGAAGTTACTGTCAAGGAGTTGGTATAA 3954 0.3981 MASSSSSFGASHSNSKQHHVFLNFRGEDTRYNFTSHLYAALCGKKIHTFMDDEEIERGDNISPTLLSAIESSKICVIIFSQDYASSSWCLDELVKIIECSEKKKLVVIPVFYHIDASHVRHQRGTYGDAFAKHEDRFRDNLTKVHMWRTALHKAANLAGWVSEKNRSEAVVIKEIVEDILDKLKCMIPHVQKKGLVGISRHIAHVESMLCSGSADVHIIGIWGMGGIGKTTIADAVFTKVSYQYEGYYFAANVREKWGNRIKLRNEVLADVLGDQSINISTPTMSSAFAVERLKCKKVLVVLDDVSLSEQIEYLVGGRDWFGPGSRIIVTTRNKEVFNSGVDEVYQVTVFNSHEALKLFSLNAFQQDSPLIEYQHLSERAVGYAKGIPLALKVLGSHLRSKRPKEWVSALEKLKKYPKAEIYDVLRLSYEGLDPEEQSIFLDIACCLKGQTKSQITSILDACDFSTEIGMRSLEDKSLVTVSKNNTVQMHDLIQEMGRFVESEKKPGERKRLWDPKEIYDVFKHNKGIESIECVVLDMSQIKELTLSPQTFQRTHRLRVLIFYIPSSDTRRINVHISRGLNCMPLEISYFRWDCFPLKSLPPQFCAEKLVELDIKHSRIGKLWDGVQDLVNLKSLCLSGCKNLVELSDLSLASKLEKVHLDDCASLLNVPSYILSLDSLLALNLRDCKQLCYIESEKPSRSLRWLNLRGCSRLVRYSVFSEELEYLNLDFTAIEELPHNLNLLPKLKKLSLRGSDIEILPASIQHLSLLRALDVSNCRRFRSMPKLPLLLQDLNASNCISLETVSNSGITMLQDSFGKLNKRTLLTQIHKEEQMSIRHRDYLGRFEFHNCIKLDQIARMTVMEEALIRIQLAAYLSSKIQVFSDPYCQADDKVSKNFDHEDFLYVSRPFYSILLGNKVPDWFLHKETNSLFITIEFSERWNLLCRCRGFAFCLVLGASESNKNIRRTGLIAGCRYNFGGKYKGTSILKSSYSDAKSDQVWLWYDQILEVADFPRTLPWKVCFEFFVRSGCSGSIVKQCGIQPLYAPFDIMQSSHEEVNREGKMPYHELEYKKDPGNYWLLRHYAHPPDGLGFPSKQQRISGCHDGHIMEPIPSTYCARKVDHIHMEHNHAEVFVNFGLIRSGYHQPRDLQCLAQMLLDNYCYYGKLVDNIDIFSSLGRLSLSDCNVESFPSRIANLSRLKDLRIRNCKSLRSLSKLPLSLQFLYVKGCTSLKTVGFAEEYFMRVDVIVRGERITRVIEVEKVSRIQVTDPLANARSWTMLKFGSSMVIEFHVASILELLNVERRDCCTIEVTVKELV* 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1671 1317 Pfam TIR domain 18 197 IPR000157 GO:0007165
Mtr1g1671 1317 Pfam C-JID domain 914 1045 IPR045344 -
Mtr1g1671 1317 Gene3D Ribonuclease Inhibitor 698 842 IPR032675 -
Mtr1g1671 1317 Gene3D Ribonuclease Inhibitor 1105 1239 IPR032675 -
Mtr1g1671 1317 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 13 1026 - -
Mtr1g1671 1317 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 160 IPR035897 -
Mtr1g1671 1317 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Mtr1g1671 1317 PRINTS Disease resistance protein signature 218 233 - -
Mtr1g1671 1317 PRINTS Disease resistance protein signature 292 306 - -
Mtr1g1671 1317 PRINTS Disease resistance protein signature 384 398 - -
Mtr1g1671 1317 PRINTS Disease resistance protein signature 764 780 - -
Mtr1g1671 1317 Gene3D Ribonuclease Inhibitor 517 697 IPR032675 -
Mtr1g1671 1317 Gene3D - 350 433 IPR042197 -
Mtr1g1671 1317 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 13 1026 IPR044974 GO:0006952
Mtr1g1671 1317 SMART till_3 17 157 IPR000157 GO:0007165
Mtr1g1671 1317 Pfam NB-ARC domain 201 416 IPR002182 GO:0043531
Mtr1g1671 1317 Gene3D - 186 349 IPR027417 -
Mtr1g1671 1317 Gene3D - 11 185 IPR035897 -
Mtr1g1671 1317 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 443 IPR027417 -
Mtr1g1671 1317 SUPERFAMILY L domain-like 535 1231 - -
Mtr1g1671 1317 SUPERFAMILY "Winged helix" DNA-binding domain 420 522 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1671 Mtr-Chr1 22018393 22040986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1671 13 811 WRKY Transcription Factor Family AT4G12020 32.357 1.66e-99 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1671 - - mtr:MTR_1g052170 2284.99