Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1658 ATGGCTTCCGTTAATCAAGAATTTAAGTACGACGTGTTCCTTAGTTTTAGAGGCGAGGATACTCGTTATGGTTTCACCGGTCATCTTTGGAAAGCTCTTGATGACAAAGGAGTCCGAACTTTCATGGATGACGGCAAGCTTCAGAAAGGAGATGAAATTACACCATCACTTTTCAAGGCAATTGATGAATCCAAGATCGCCATAGTTGTCCTCTCTAAGAATTACGCTTCTTCATCCTTTTGCTTACAAGAACTTTCAAAGATCCTTGATACAATGAAAGATAAGGCGGGTCATTCCGTTTTTCCGGTATTTTATAAGGTGGATCCTTCTGATATACGAAAGTTGAAAAGAAGTTTTGGAGAAGCAATGGATAAACATAAGGCCAACTCCAGTTTGGATAAATGGAAGGTGTCTCTTCACCAAGTTGCTGATTTGTCCGGCTTTCATTACAAAGGGGATATGCCTGAGCATAAGTTTATTGGGGAGATTGTTGAACAAGTATTGGGAATTATAAAACTTGTTTCCTTACATGTTGGTGATTACCTAGTTGGACTGGATCACCAAAAGCAACATGTGACTTCCCTTTTGAATTTTGGGTCAGATGATACGGTCCACATGGTAGCAATCCATGGGATTGGTGGAATAGGGAAAACAACTCTTGCTATATCTGTGTATAATTTGATTGCCCATCAATTTGATGTTTCATGTTTTCTTGAAAATGTTAGAGAAAATCATGAAAAACATGGGTTACCATATCTCCAAAAAATCATTCTTTCAAAAGTAGCTGAGGAGAAAAAGGAGTTAACAGGTGTTCTCCAAGGAATTTCAATATTGGAGCAGAGGCTCAAACAAAAGAAGTTACTTTTGATTCTAGATGATGTTAACAAATTAGAGCAATTAGAAGCTCTGGCTGGAAAACACAAATGGTTTGGCCCCTCAAGTCGAATCATCATTACAACTCGGGACAAAAAGTTGCTAACATGTCATGGGGTTGAACGCACATATGAGGTGAATGGGTTGAATGACAAAGATGCTTTGGAGTTGGTTAGATGGAAAGCTTTTAAAGATGAATTTAGTCCAAGCTGCAATAACAATGTTTCATTAGCACAAATGCATGTTTTAGAACGTGTCGTAGCATATGCTTCTGGTCATCCACTTGCTTTGGAGGTCATGGGTTCTCACTTTTATAATAAGACAATAGAACAATGTAAAGTTGCACTAGATCATTATGAAAAAGTTCCTCATAAAAAGATCCAAACGACACTACAACTGAGCTTTGATGCTTTGGAGGACAAAGATAAATTTGTTTTTCTTGACATTGCTTGTTGCTTCAAAGGATGGAAATTAACAAGGGTCGAAGAAATACTTCATGCTCAGTACGGTAATATCATGAAAGATAACATTAATGTGTTAGTGGAAAAATCTCTCATAAAGATAAGTGAGTCTGGTAATGTGACAATGCATGATTTGGTAGAAGATATGGGGAAAGAAATTGTTAGACAAGAATCACCTGAAAATCCTGGAAAACGCAGTAGATTATGGTTCTCTGAAGATATAATGCACGTTTTAGAGGAAAATACAGGAACAAATCAAATAGAAATCATACGTTTCGATTGTTGGACTAGAGTAGCATGGGATGGAGAAGCTTTCAAGAAGATGGAAAATCTCAAAACACTAATTTTTTCTGATTATGTTTTCTTTAAAAAACATCCCAAACATCTTCCAAATAGTCTAAGAGTGCTGGAATGTCGCTATCCTTCATCAGGTTTCCTTGTCGCTCTTTCTTTGTTTAACTTTCCCACAAAGAAGTTTCAGAATATGAGAGTTTTGAATCTCGAAGATGGTAATGGTTTAGCACAAATACCTGATATATCTGGTCTACCAAATTTAGAAAAACTTTCAATTAAAAATTGTTGGGAACTAATTGCAATTGATAAATCGGTTGGTTTTCTAGGTAAACTTAAAATCTTGAAAATATGCAACACTAAAATCAAGAGTGTTCCACCCCTCATGTTACCTTCTCTAGAAGAACTTGATCTTTCAGGATGTAGTATTCTTGAGGGTTTTTCACATGAGGTAGATGGGTTTGGTGATAAGCTTAAAACCATGAGTTTTAGAGGTTGCAGGAAGCTAAGGAGTATTCCACCTCTCAAGTTGAATTCGCTAGAAACCCTTGATTTTTCATCTTGTCATAGGCTCGAGAGTTTTCCACTTGTGGTGAACGGGTTTCTTGGAAAACTTAAAACCCTGCTTGTTACAAATTGTTACAATCTTAAGAGCATCCCACCTCTCAAGTTGGATTCATTAGAAGTACTTGACCTTTCATGTTGTTGTAGTCTTGAAAGTTTTCCATGTGTGGTGGATGAGTTGTTGGATAAACTTAAATTCTTGAACATTGAATGTTGCATCATGCTTAGGAATATCCCGCGGCTTAGGTTGACTTCATTGGAACATTTCAATCTTTCATATTGTTATAGTCTCAAGAGTTTTCCAGAAATATTGGGAGAGATGAGAAATATGCCAGGAGTCCTCATGGATGAAACTCCCATAAAAGAATTGCCGTTTCCATTTAAAAATCTTACCCAACCTAAAACATTATGTGAATGTGGATATGTTTACTTACCAAATAGGATGTCAACACTGGCTGAATTTACCATCAAGAATGAAGAAAAAGTGAACACAATGCAATCTTTACATGTAAAGTATATTTGTGTCAGGAGGTGCAATCTTTCAGATGAATATCTGTCAAAAAGTCTTATGTTATTTGCTAATGTGAAAGAATTACACCTAACTAGTAATCACTTCACAGTAATTCCTAAATCTATCGAATATTGTAAATCTTTGTGGAAACTCGTCTTGGATGATTGTAAGGCACTTCAAGAAATTAAAGGGATTCCTCCATGCTTAAGAATGTTATCTGCACTAAACTGCATATCATTGACTTCGTCGTGCAAAAGCAAATTACTAAATCAGGAATTACATGAGGCTGGAAACACTTGGTTTCGTTTGCCACGAGCGACATTTCCAGAGTGGTTCGACCACCACTGTTTGGCAAGATTGTCATTTTCTTTCTGGTTTCGTAACAAGTTTCCTGCCATAGCTCTCTGTGTTGTTTGTTCATCGACATTGCACGATTCTCAACGTCCTGTAAGAGTGGTCATCAATGGCAATACATTTTTCTATACACATGATTCGAAGATAGATAGGTCATCACGGCCGGACATGTATCATTTGCATCTTTTTCATATGCAAATGGAAAACTTCAATGAAAATATGGACAAAGCACTCTCAGAAAATAAGTGGAATCATGCAGAGCTTGATTTTGGACTCTCATTCCTGGAAAGTGGAATCCATGTATTGAAAGAGAGAAGTAGCATGAACGATATTCGATTCATCAACCCAAAGTATGATGTGTTCACTCGGGATTTTGAAGCCATGCTACCACCAGAGTCCTTTAACTTGTCAGCAGAACTTTCATCAACTTCCAATGAAATTGCACCGTTGCTGAACAACTTACCTTTGAGATCATCTTCTAAAAGGCACTTTTCTCATAAGAAAGAACACCATTGCTTGATTATGTGA 3582 0.3693 MASVNQEFKYDVFLSFRGEDTRYGFTGHLWKALDDKGVRTFMDDGKLQKGDEITPSLFKAIDESKIAIVVLSKNYASSSFCLQELSKILDTMKDKAGHSVFPVFYKVDPSDIRKLKRSFGEAMDKHKANSSLDKWKVSLHQVADLSGFHYKGDMPEHKFIGEIVEQVLGIIKLVSLHVGDYLVGLDHQKQHVTSLLNFGSDDTVHMVAIHGIGGIGKTTLAISVYNLIAHQFDVSCFLENVRENHEKHGLPYLQKIILSKVAEEKKELTGVLQGISILEQRLKQKKLLLILDDVNKLEQLEALAGKHKWFGPSSRIIITTRDKKLLTCHGVERTYEVNGLNDKDALELVRWKAFKDEFSPSCNNNVSLAQMHVLERVVAYASGHPLALEVMGSHFYNKTIEQCKVALDHYEKVPHKKIQTTLQLSFDALEDKDKFVFLDIACCFKGWKLTRVEEILHAQYGNIMKDNINVLVEKSLIKISESGNVTMHDLVEDMGKEIVRQESPENPGKRSRLWFSEDIMHVLEENTGTNQIEIIRFDCWTRVAWDGEAFKKMENLKTLIFSDYVFFKKHPKHLPNSLRVLECRYPSSGFLVALSLFNFPTKKFQNMRVLNLEDGNGLAQIPDISGLPNLEKLSIKNCWELIAIDKSVGFLGKLKILKICNTKIKSVPPLMLPSLEELDLSGCSILEGFSHEVDGFGDKLKTMSFRGCRKLRSIPPLKLNSLETLDFSSCHRLESFPLVVNGFLGKLKTLLVTNCYNLKSIPPLKLDSLEVLDLSCCCSLESFPCVVDELLDKLKFLNIECCIMLRNIPRLRLTSLEHFNLSYCYSLKSFPEILGEMRNMPGVLMDETPIKELPFPFKNLTQPKTLCECGYVYLPNRMSTLAEFTIKNEEKVNTMQSLHVKYICVRRCNLSDEYLSKSLMLFANVKELHLTSNHFTVIPKSIEYCKSLWKLVLDDCKALQEIKGIPPCLRMLSALNCISLTSSCKSKLLNQELHEAGNTWFRLPRATFPEWFDHHCLARLSFSFWFRNKFPAIALCVVCSSTLHDSQRPVRVVINGNTFFYTHDSKIDRSSRPDMYHLHLFHMQMENFNENMDKALSENKWNHAELDFGLSFLESGIHVLKERSSMNDIRFINPKYDVFTRDFEAMLPPESFNLSAELSSTSNEIAPLLNNLPLRSSSKRHFSHKKEHHCLIM* 1194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1658 1193 Gene3D Ribonuclease Inhibitor 546 742 IPR032675 -
Mtr1g1658 1193 Gene3D Ribonuclease Inhibitor 743 847 IPR032675 -
Mtr1g1658 1193 Gene3D - 339 430 IPR042197 -
Mtr1g1658 1193 Pfam NB-ARC domain 195 421 IPR002182 GO:0043531
Mtr1g1658 1193 Gene3D Ribonuclease Inhibitor 873 1012 IPR032675 -
Mtr1g1658 1193 SUPERFAMILY L domain-like 535 837 - -
Mtr1g1658 1193 Pfam TIR domain 9 167 IPR000157 GO:0007165
Mtr1g1658 1193 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 699 1109 IPR044974 GO:0006952
Mtr1g1658 1193 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 682 IPR044974 GO:0006952
Mtr1g1658 1193 SMART till_3 9 145 IPR000157 GO:0007165
Mtr1g1658 1193 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 148 IPR035897 -
Mtr1g1658 1193 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 440 IPR027417 -
Mtr1g1658 1193 SUPERFAMILY "Winged helix" DNA-binding domain 416 524 IPR036390 -
Mtr1g1658 1193 Gene3D - 177 332 IPR027417 -
Mtr1g1658 1193 SUPERFAMILY RNI-like 765 984 - -
Mtr1g1658 1193 Gene3D - 3 176 IPR035897 -
Mtr1g1658 1193 PRINTS Disease resistance protein signature 206 221 - -
Mtr1g1658 1193 PRINTS Disease resistance protein signature 281 295 - -
Mtr1g1658 1193 PRINTS Disease resistance protein signature 381 395 - -
Mtr1g1658 1193 PRINTS Disease resistance protein signature 670 686 - -
Mtr1g1658 1193 ProSiteProfiles TIR domain profile. 8 171 IPR000157 GO:0007165
Mtr1g1658 1193 PANTHER ARCHAEAL ATPASE 699 1109 - -
Mtr1g1658 1193 PANTHER ARCHAEAL ATPASE 20 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1658 Mtr-Chr1 21657915 21665895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1658 204 849 WRKY Transcription Factor Family AT5G45050 29.832 1.97e-63 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1658 - - mtr:MTR_0012s0290 1983.38