Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1655 ATGGAGAAAAGTATCCTTATCATTCTAGATAACATATGGACCATACTTGATTTGAAAGAAGTGGGGATACCAGTTGGTGATGAACATAATGGTTGCAAATTGTTGATGACAAGTAGAAATCAAGATGTGTTGCTGCAAATGGATGTTCCAAAGGATTTCACTTTCAAAGTTGAAGTTATGAGTGAAAATGAGTCATGGAGCTTGTTTCAATTTATGGCAGGGGATGTAGTTAAAGATAGAACTTTGAAAGATGTAGCATATCAAGTTGCCCAAAAATGTGAAGGTTTGCCTCTTAGGGTAGTGACAGTAGCGAGTGCAATGAAAAATAAGAGGGATGTCAAATCTTGGAAAGATGCATTAAGGAAATTACAAAGTCATGACTCATTAGATGCGTTAACTTATTCTGCTTTGGAATTGAGCTATGACTCATTGGATAGTGATGAAATGAGGGACCTCTTCTTGCTTTTTTCATTACTTCCAGGTAATGATGTATCGTACTTTCTGAAAGTTGCAATGGGTCTGGACATATTAAAACATGTTAATATTGTTGATGATGCAAGAAATAGACTTTACACAATGATCGAATCTTTGGAGGCATCTTGTCTTTTGCTTGAAGTTAAAGTAGATGGAAAGATCCAAATGCATGACTTTGTTTGTGAGTTTGCTATCTCCATTGCATGCAGGGACAAACATGTATTTCTAATGAAACAACGAGATGATCAGGAATGGCCAACCAATGCTTTTTTACAAAGGTGCACACAGATTGTTGTAGATTACTGTCATATGCACGAGCTTCCTCAAACAATTGATTGTCCTAACATGAAGTTTTTATGTTTGGCTAGTGGGAATCGTTCTTTAAAAATCCCAGATGATTATTTTAAGGGTATGGGAAGCCTTAGAGTGCTAGATTTAACATGTCTGAACTTGTCTTCATTACCGTTTCAGTTCCTAACCGACCTTCAAACATTGTGTTTGAATTTCTGCGTTTTGGAAAATATGGATGCAATAGAAGCTTTACAAAATTTGAAAATTCTTTGCCTCTGGAATTCTTCAATGATCAAGTTGCCAAGACAAATAGGGCAATTGACTCAATTGAGAATGCTTGATTTGAGAAGTTCAGGAATAGAAGTAATCCCTCACAACATTATATCAAGCTTGACTAAATTGGAGGAGTTGTACATGGGAAATACCTCTATTAATTGGGAAGATGTCAGTTCAACGGTTCATAATGAAAATGCTAGTCTTGCCGAGCTTCGAAAACTACCCAAATTGACAGCTCTAGAATTACAAGTTTGTGGGACTTGGATGTTGCCAAGGGACTTGCAATTGGTGTTTGAGAAGCTCGAAAGATATAAAATAGCTATTGGAGATGTATGGGACTGGTCTGACATCAAGGATGGAACCTTAAAAACATTGATGCTCAAACTTGGTACAAACATACATTTGGAGCATGGAATTAAAGCATTGATTAAAGGTGTTGAGAATTTGTATTTGGATGATGTAGATGGAATTCAAAAATGTGCTTCCAAACCTAAATAG 1539 0.3632 MEKSILIILDNIWTILDLKEVGIPVGDEHNGCKLLMTSRNQDVLLQMDVPKDFTFKVEVMSENESWSLFQFMAGDVVKDRTLKDVAYQVAQKCEGLPLRVVTVASAMKNKRDVKSWKDALRKLQSHDSLDALTYSALELSYDSLDSDEMRDLFLLFSLLPGNDVSYFLKVAMGLDILKHVNIVDDARNRLYTMIESLEASCLLLEVKVDGKIQMHDFVCEFAISIACRDKHVFLMKQRDDQEWPTNAFLQRCTQIVVDYCHMHELPQTIDCPNMKFLCLASGNRSLKIPDDYFKGMGSLRVLDLTCLNLSSLPFQFLTDLQTLCLNFCVLENMDAIEALQNLKILCLWNSSMIKLPRQIGQLTQLRMLDLRSSGIEVIPHNIISSLTKLEELYMGNTSINWEDVSSTVHNENASLAELRKLPKLTALELQVCGTWMLPRDLQLVFEKLERYKIAIGDVWDWSDIKDGTLKTLMLKLGTNIHLEHGIKALIKGVENLYLDDVDGIQKCASKPK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1655 512 PANTHER - 2 506 - -
Mtr1g1655 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 155 IPR027417 -
Mtr1g1655 512 PANTHER RPP4C3 2 506 - -
Mtr1g1655 512 Pfam NB-ARC domain 3 128 IPR002182 GO:0043531
Mtr1g1655 512 Gene3D Ribonuclease Inhibitor 244 509 IPR032675 -
Mtr1g1655 512 Gene3D - 59 145 IPR042197 -
Mtr1g1655 512 Gene3D - 1 54 IPR027417 -
Mtr1g1655 512 SUPERFAMILY L domain-like 214 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1655 Mtr-Chr1 21563808 21566536 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1655 3 197 WRKY Transcription Factor Family AT5G45050 23.333 9.67e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1655 - - mtr:MTR_0012s0150 974.541