Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1611 ATGGTATTTTCAAGAAATCAACATGGTTGGGAAAACACCAAAGGCTTCACTCTTCAAGTCCTAACAGGAAGGTGGTTTATGGTGTTTTCATCATTTATGATCATGTCAGTATCTGGAGCAAGCTACATGTTTGGTCTATACTCAAGAGAAATCAAATCAGTTTTGGGTTATGACCAATCCACTCTCACTCTCTTAAGCTTCTTCAAGGACTTGGGATCTAACATAGGCATTCTCTCAGGCCTACTCAATGAAATCACACCTCCTTGGGTTGTCTTAACAATTGGTGGTCTTCTCAACTTTTTTGGCTATTTCATGATTTGGCTTGCAGTCACAAGAAAAATCCCAAAACCTCCAATATGGAATATGTGCTTATACATATTTATTGGAGCAAATTCTCATTGTTCAACCAACACTGGAGCTTTAGTCACCAGTGTAAAGAATTTCCCTGGTAGTAGAGGTGTTGTCATAGGCCTTTTGAGTGGTTATCTTGGTTTGAGTGGAGCTATCATTACTCAACTATACTATGCCTTCTATGGAAATGACTCTAAATCTTTAATTTTGCTTATGGCTTGGTTACCAACTGCTGTAACTTTTGTTTTTATGCCAGTTATTAAGCACCATAAGAGAGCTGAACAACCAAATGATTCCAAAGCTTTTTATAATTTCCTTTACATGTCTTTAATCCTTGCAGGGTTCCTCATGATAATGATCATAGTGCAAACATGTTTCAACTTTACTAAGAGTGAGTATTATGTCACTTCCATTGTGATGCTTCTCTTGCTCATCCTCCCTCTTTTTGTTGTTATTATGGAAGAACAAAGGATTTGGAAGAACAAAAAAGAGCAAATCAATGGTGAAGATTCTCCTCCTAAGCCTTTGAATATAACCACACAGATGCCACAGACTCACCAATCTACAGGAGAGACTACTCAAAATCAAAATCAAAATCAAAATCAAAATCAGAATCAGAAGCAAGTTTCCTCTTGGAGAAACATACTCTTTCCTCCAAGTAGAGGTGAAGATCATACAATATTTCAAGCCATTTTCAGCCTTGACATGATGACTCTTTTTGTAGCCACAATATGTGGACTTGGTGGAACTCTTACTGTGGTAAATAACTTGAGTCAAATTGGACTATCTTTAGGATATCCTGCACATAGTATAACCACATTTGTGTCCTTAATGGCAATTTGGATCTATCTAGGTAAAGTTACACAAGGGGTTATTTCAGAATTTATCATAACAAAGTTAAAACTCCCTAGACCACTCATGCTCACATCAATCCTTATATTCTCTTGTTTAGGTCACCTTCTAATTGCATTTAATGTCCCAAATGGTCTTTATGTAGCATCAATTATTATTGGTTTCTGCTTTGGTGCAAATTGGCCAGTACTATTTTCAATCATATCTGAACTCTTTGGTCTTAAATATTACTCAACATTGTACAATGTTGGGTCAATAGCAAGTCCAATTGGGTCATACTTGTTAAGTGTGAGGGTTGCTGGTCATCTCTATGACAAAGAAGCCCTAAAGCAAATGGCAGCATTAGGGTTAAAGAGGAAGCCAGGGGAGGAGTTGAATTGCAATGGAAGTGAATGCTACAAATTGGCTTTCATTATAATCACTGCTGTTAGCCTCTTAGGGGCACTTGTGTCTTTAACTTTGGTGATAAGGACTAGAGAGTTTTATAAAGGTGACATATACAAGAAGTTCAGAGAGGAAGCTAGAAATAATGAAAATGAATTGGTTGTGACTCAGAACAAGGTTGGACCTGCTTCAAATGATGATGCATAG 1794 0.3718 MVFSRNQHGWENTKGFTLQVLTGRWFMVFSSFMIMSVSGASYMFGLYSREIKSVLGYDQSTLTLLSFFKDLGSNIGILSGLLNEITPPWVVLTIGGLLNFFGYFMIWLAVTRKIPKPPIWNMCLYIFIGANSHCSTNTGALVTSVKNFPGSRGVVIGLLSGYLGLSGAIITQLYYAFYGNDSKSLILLMAWLPTAVTFVFMPVIKHHKRAEQPNDSKAFYNFLYMSLILAGFLMIMIIVQTCFNFTKSEYYVTSIVMLLLLILPLFVVIMEEQRIWKNKKEQINGEDSPPKPLNITTQMPQTHQSTGETTQNQNQNQNQNQNQKQVSSWRNILFPPSRGEDHTIFQAIFSLDMMTLFVATICGLGGTLTVVNNLSQIGLSLGYPAHSITTFVSLMAIWIYLGKVTQGVISEFIITKLKLPRPLMLTSILIFSCLGHLLIAFNVPNGLYVASIIIGFCFGANWPVLFSIISELFGLKYYSTLYNVGSIASPIGSYLLSVRVAGHLYDKEALKQMAALGLKRKPGEELNCNGSECYKLAFIIITAVSLLGALVSLTLVIRTREFYKGDIYKKFREEARNNENELVVTQNKVGPASNDDA* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1611 597 PANTHER MFS TRANSPORTER 5 595 - -
Mtr1g1611 597 Coils Coil 568 588 - -
Mtr1g1611 597 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 5 595 - -
Mtr1g1611 597 SUPERFAMILY MFS general substrate transporter 215 565 IPR036259 -
Mtr1g1611 597 Pfam Nodulin-like 24 269 IPR010658 -
Mtr1g1611 597 CDD MFS_Mch1p_like 23 549 - -
Mtr1g1611 597 SUPERFAMILY MFS general substrate transporter 8 209 IPR036259 -
Mtr1g1611 597 MobiDBLite consensus disorder prediction 289 324 - -
Mtr1g1611 597 Gene3D MFS general substrate transporter like domains 212 573 IPR036259 -
Mtr1g1611 597 MobiDBLite consensus disorder prediction 280 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1611 Mtr-Chr1 20299107 20301244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1611 14 574 Nodulin-like Gene Family AT2G39210 61.141 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1611 - - gmx:100789645 873.233