Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1609 ATGGTAGGAAAAGAGATTGTTGAACCTAACACTTGCATTAGGGGTTGCTGCACAAGCTCCTCTATTCCCCTACACCTCCCTCCTTCCTCTTACGAACTTCTTTTTCCTATTGCCAGAGGTGCTGAAAGTGTTGTTTATGAAGGCACTCTGAATGGAGACAAAGTTGCTGTTAAGAAACCCATTTTGTCTCTTTCTCAACACATCAATAACTTCCACAAACAATTACAATTGCTTTGCAAGCTAGATCACCCGGGAATAGCAACACTAATTGCCGCCCATGCAAAACCACCCAATTATATGTTTTTCTTCAAGTTATATGAGTCTTCCAATCTCGGCCACAAGTTACATGTAGAAGAATGGGCCCCAACCGTCAATGACGCGCTTATGATAACAATGCAGTTAGCAAAGGCCTTGCAATATCTGCATAACCTTGGGATTCTGCATAGAGATGTGAAACCATCAAATATTCTTCTTGACATAAATCTCTGTCCACACCTCACAGATTTTGGTTTGGCTGAATACAAAAGTGATATTAAGGGAGTTTCTCTTGAGAATTGGAAGTCTTCTGGAAAACCTACTGGTGGTTTTCACAAAAAGAATATGGTCGGAACACTTGTTTATATGGCACCTGAAATATTAAAAAAGGAATTACACACAGAAAAGTCAGATGTATACAGTTTTGGGATATCAATCAATGAACTCCTTACTGGTGTTGTGCCATATACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTACTTGAGATGAACTATACTGAGCAACAACTAACAGCAGCTGTTGTTTCGGATGGATTACGACCGGTCCTTGCCAGCGAGGAGTTGGGTATACCATCAAGATTAGTATCGATGATACGAAAGTGCTGGGATGCTAATCCTAAAAGTAGACCTTCCTTTGATGATATTGTCAAGGAACTTGATTTTATTATGGAACACAGGAAGGTAAAGAAGGTGGAAGATATGCATATTAGACCTTGTAACTTGTCTGTTGACCAACTTGTGGACAAGACTTATCAAGAGAGTATTAGCTGGTCTGCTCAAGGCGAGCTTTTGGCTAGGAATACCTCTAGCTCAACTGATTCTGGTTTCAGAACATGGTGCGAGTCTTACGACGAGCCTTTTGCATACCGTCCAATACTGTCTTGGGGATCTTATGCTACTTGTGGGAGAAGGGAGGCTATGGAGGACACACATTTCATTCTGCCCCATGTTTTCAATGAAAAGGATGTCTATGCTTTTGGTATCTTCGATGGCCATAGAGGCGCAGCAGCTGCAGAGTTTTCTTCTAGGGCTGTACCAGCAGTTTTGCAAACTCTTGGTTTTAAGACCAGTCCTGCTAATGCACTAGTGGAAGCATTCCTTAGAACAGATACTGCCTTCAGAAAAGAGCTTGCTTCCTATCGCAAATCCAACAGATGTATCCAGAAGGATTGGCATCCTGGTTGTACAGCGATTGCTGCTATTGTAAGTGGGAACAAGCTATTTGTTGCTAATAGTGGCGATTGTCGGGCAATCTTATATCGTGCTGGTAACCCCATTGCTCTGAGTAAGGATCATGTTGCAAGCTGTCTTCAAGAGAGAGAGCGTGTTATTCGTCAAGGGGGCCAAGTTCATTGGCAAGTTGATACCTGGAGAGTTGGTCTTCCTGCGCTTCAGGTTACTCGTTCTATCGGTGACGATGACCTGAAGCCTGCTGTAACTGCAGAACCTGAGATAACTGAGAACACCTTACATGCAGAGGATGAATTTCTGGTCATGGCTAGCGATGGTCTGTGGGATGTGATGAGCAGTTTGGATGTGATAAATATAATAAAGGACACAGTTAAAGAGGCAGGTATGTGCTCTAAGAGGTTGGCTACCGAAGCTGTGGAACGTGGCAGCAAGGATAACATTACGGTTATTGTTGTTTTTTTAAGACCTGTATCAACAGCAGAGAGAATTTATTAG 1965 0.427 MVGKEIVEPNTCIRGCCTSSSIPLHLPPSSYELLFPIARGAESVVYEGTLNGDKVAVKKPILSLSQHINNFHKQLQLLCKLDHPGIATLIAAHAKPPNYMFFFKLYESSNLGHKLHVEEWAPTVNDALMITMQLAKALQYLHNLGILHRDVKPSNILLDINLCPHLTDFGLAEYKSDIKGVSLENWKSSGKPTGGFHKKNMVGTLVYMAPEILKKELHTEKSDVYSFGISINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLASEELGIPSRLVSMIRKCWDANPKSRPSFDDIVKELDFIMEHRKVKKVEDMHIRPCNLSVDQLVDKTYQESISWSAQGELLARNTSSSTDSGFRTWCESYDEPFAYRPILSWGSYATCGRREAMEDTHFILPHVFNEKDVYAFGIFDGHRGAAAAEFSSRAVPAVLQTLGFKTSPANALVEAFLRTDTAFRKELASYRKSNRCIQKDWHPGCTAIAAIVSGNKLFVANSGDCRAILYRAGNPIALSKDHVASCLQERERVIRQGGQVHWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITENTLHAEDEFLVMASDGLWDVMSSLDVINIIKDTVKEAGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY* 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1609 654 SMART serkin_6 31 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1609 654 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Mtr1g1609 654 Pfam Protein phosphatase 2C 392 637 IPR001932 -
Mtr1g1609 654 SMART PP2C_SIG_2 402 644 IPR001932 -
Mtr1g1609 654 PANTHER PROTEIN PHOSPHATASE 2C 3 654 IPR015655 GO:0004722|GO:0006470
Mtr1g1609 654 ProSiteProfiles PPM-type phosphatase domain profile. 387 644 IPR001932 -
Mtr1g1609 654 Pfam Protein kinase domain 36 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1609 654 CDD PP2Cc 389 644 IPR001932 -
Mtr1g1609 654 Gene3D - 379 649 IPR036457 -
Mtr1g1609 654 SUPERFAMILY PP2C-like 378 646 IPR036457 -
Mtr1g1609 654 ProSiteProfiles Protein kinase domain profile. 31 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1609 654 SMART PP2C_4 377 642 IPR001932 -
Mtr1g1609 654 PANTHER - 3 654 - -
Mtr1g1609 654 Gene3D Transferase(Phosphotransferase) domain 1 23 343 - -
Mtr1g1609 654 SUPERFAMILY Protein kinase-like (PK-like) 17 321 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1609 Mtr-Chr1 20276755 20284495 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1609 100 654 PP2C-type Phosphatase Gene Family AT2G40860 63.636 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Mtr1g1609 Pkinase 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1609 - - gmx:100785390 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr1g1609 1 20276755 20284495 Mtr1g1609 1 20276755 20284495 ECH