Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1598 ATGTACGGCGGTGGTGAGCGTGAATGCGAATCTGAGAGGACGATGATGATTATGCAGAACGACGAAGATGAAGAAGACGAAGAAGGTTCTTCTTCTTCTTTCAAGAGCTGGGCAAAGCAAACTGAAGAGAGCTATCAATTGCAGCTCGCACTTGCTCTTCGCATTTCATCTCACTCTGCTTCTTCCGCTCAATCCAATCGCTTCTTGGATTTGGAATCCACCTCTTCTCCTTCTCCTTCGTCTTCTTCTTCCGATTCTCCCCAATCACTTTCACACCGTTTTTGGGTAAATGGTTGTTTGCAATACTCTGACAAAGTTCTAGACGGATTTTACCTAATTCATGGGATGGATGCATATACATGGACTATAAGTACCGATATGCAGAATGTTGGTATGATTCCATCATTTGAATCACTAATGTCGGTTAAACCGTGTGATAACTCGTCAGTTGTAGTCGTTGCTATTGACAAATCAAGAGACCCTGCCTTGAGAGAACTGCAAAGTGGGGTATTAAGTCTTTCAAGTAACTGGATTACCATCAAAGATGCAACTGATCAGCTCGCAAATCTTGTTTGTAGTAGGATGGGGGGAGGATCTTCCGATGAGGAAAATTTAGGTGCGCGCTGGAAGGAATGCTCTGATATTCTTAAAAGCTGTCTGCAGTGTATCATTCTTCCAATTGGAAGCTTACCCGTTGGCCTTTGTGTTCATCGAGCATTGCTCTTTAAAGTGTTAGCGGATTTAATCAACCTACCGTGTCGAATCGCTAAGGGATGCAAGTATTGTAGAAAGGACACTGGTGCTTCTTGTATAGTGCAATTTGGTTCTGACAGGGAGTATATGATTGATTTAGTAGGAAGGCCCGGAGATACATGCCAACCTGATTCTTCAGTGAATTCTGCATCTTCGATGTTGATCCCTTCACCATTATGTCATCCAAGGTTCAAGCCAGTTGAAACAGCTGAATATACAAAGACAATGGCCCAATTGTATTTCTTGGACAATCAAGCACTGCATCTTGTATTTGATACCACGTCAGGAGGTACTGTTGATTGTAGGGACAATGTGGATCTTCAGCAAACTGAAATGTTTGGTGCAAACTATGCTGGTGGGAACAACCATATAGGTGCTTTCAGTCCTGGTACCGAGGAACATGTGTCTTTCAATGAAGCAAACCAATCAGTAGTGAATTATTCGAGTCATGAAGTTGACCTTGAGGAGGAGGATCTGGACATTCCGTGGAGTGAACTTATTTTGAAGGAGAACATTGGGACAGGGTCATTTGGAACTGTACTTCGTGCGGACTGGCGTGGCTCTGATGTTGCTGTGAAGATACTTAAGGTGCAAGGTTTTGATTCCGAACGATTTGAAGAGTTTCTAAAGGAGGTCACACTCATGAAGCGCCTACGTCATCCAAACATTGTACTTCTAATGGGCGCTGTTATCCAGCCACCAAAGTTATCAATAGTAACAGAATATTTATCAAGAGGAAGCTTGTATGAATTTCTGCAGATGCCAGGTGTTGGTTCCTCAATCAGCGAGAAGCGTCGTTTAAGTATGGCTTATGACGTGGCAAGTGGAATGAATTATCTTCATCAAATGAAACCTCCCATTGTTCATAGAGATTTGAAGTCTCCAAATCTTTTGGTGGATGATTCATACACTGTTAAGGTATGTGACTTTGGCCTTTCACGCACAAAGGCAAATACATATCTTTCATCTAAAACAGCTGCTGGAACTCCTGAATGGATGGCACCAGAAGTCATCAAAGGTGAACTATCAAATGAAAAATGTGATGTATTCAGCTTTGGTGTAATCTTGTGGGAACTGGTGACCCTTCAACAACCATGGAGGCAGTTAAATCCTTCACAGGTTGTTGCAGCTGTTGCTTTTATGGGCAAAAGGCTAGAAATTCCGAGGCATGTGAATCCTCAAGTGGCTGCCTTAATTGAGCTCTGCTGGTCTACGGAACCAAGGAGGCGGCCTTCTTTCTCCTACATTATGAAATGTTTGCAGCAAATAATTGCCAATGCTAAAGAGTGA 2043 0.4278 MYGGGERECESERTMMIMQNDEDEEDEEGSSSSFKSWAKQTEESYQLQLALALRISSHSASSAQSNRFLDLESTSSPSPSSSSSDSPQSLSHRFWVNGCLQYSDKVLDGFYLIHGMDAYTWTISTDMQNVGMIPSFESLMSVKPCDNSSVVVVAIDKSRDPALRELQSGVLSLSSNWITIKDATDQLANLVCSRMGGGSSDEENLGARWKECSDILKSCLQCIILPIGSLPVGLCVHRALLFKVLADLINLPCRIAKGCKYCRKDTGASCIVQFGSDREYMIDLVGRPGDTCQPDSSVNSASSMLIPSPLCHPRFKPVETAEYTKTMAQLYFLDNQALHLVFDTTSGGTVDCRDNVDLQQTEMFGANYAGGNNHIGAFSPGTEEHVSFNEANQSVVNYSSHEVDLEEEDLDIPWSELILKENIGTGSFGTVLRADWRGSDVAVKILKVQGFDSERFEEFLKEVTLMKRLRHPNIVLLMGAVIQPPKLSIVTEYLSRGSLYEFLQMPGVGSSISEKRRLSMAYDVASGMNYLHQMKPPIVHRDLKSPNLLVDDSYTVKVCDFGLSRTKANTYLSSKTAAGTPEWMAPEVIKGELSNEKCDVFSFGVILWELVTLQQPWRQLNPSQVVAAVAFMGKRLEIPRHVNPQVAALIELCWSTEPRRRPSFSYIMKCLQQIIANAKE* 681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1598 680 ProSiteProfiles Protein kinase domain profile. 417 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1598 680 SMART serkin_6 417 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1598 680 MobiDBLite consensus disorder prediction 1 37 - -
Mtr1g1598 680 ProSitePatterns Protein kinases ATP-binding region signature. 423 444 IPR017441 GO:0005524
Mtr1g1598 680 CDD STKc_MAP3K-like 423 669 - -
Mtr1g1598 680 Pfam Ethylene-responsive protein kinase Le-CTR1 88 290 - -
Mtr1g1598 680 Gene3D Transferase(Phosphotransferase) domain 1 496 680 - -
Mtr1g1598 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Mtr1g1598 680 Gene3D Phosphorylase Kinase; domain 1 410 495 - -
Mtr1g1598 680 PRINTS Tyrosine kinase catalytic domain signature 491 504 IPR001245 GO:0004672|GO:0006468
Mtr1g1598 680 PRINTS Tyrosine kinase catalytic domain signature 532 550 IPR001245 GO:0004672|GO:0006468
Mtr1g1598 680 PRINTS Tyrosine kinase catalytic domain signature 579 589 IPR001245 GO:0004672|GO:0006468
Mtr1g1598 680 PRINTS Tyrosine kinase catalytic domain signature 598 620 IPR001245 GO:0004672|GO:0006468
Mtr1g1598 680 PRINTS Tyrosine kinase catalytic domain signature 642 664 IPR001245 GO:0004672|GO:0006468
Mtr1g1598 680 MobiDBLite consensus disorder prediction 1 18 - -
Mtr1g1598 680 SUPERFAMILY Protein kinase-like (PK-like) 395 671 IPR011009 -
Mtr1g1598 680 Pfam Protein tyrosine and serine/threonine kinase 418 671 IPR001245 GO:0004672|GO:0006468
Mtr1g1598 680 MobiDBLite consensus disorder prediction 68 88 - -
Mtr1g1598 680 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 26 360 - -
Mtr1g1598 680 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 389 678 - -
Mtr1g1598 680 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 26 360 - -
Mtr1g1598 680 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 389 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1598 Mtr-Chr1 20191361 20203790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1598 37 678 MAP Kinase Kinase Kinase AT5G03730 57.681 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Mtr1g1598 PK_Tyr_Ser-Thr 1.8e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1598 K14510 - gmx:100807496 1093.95