Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1590 ATGGAAGCTGAAATGGTTGAAGAAGATATTGTGAGGTCAATGAGTGATTTAAGGAAGAGGGTGAGTTTCGGAGAGTTGATTCGGACCTCAGCAAGCTTCCACGAGAAAACTAAAAGCGAAATAAACGAAGAGCAGGATTTGAAATGGGAAGCTTTATGGAGGCTTCCAACATATGATAGAATGAGAAAAGGGATTTTGAAGCAAGTTCTTGATAATGGAAAGGTTAACTATGAAGAGGTTGATATCACAAAGCTTGGAGTAGAAGAAAAGAAGCATCTTCTTGAGAGTATAATTAAGACTGCTGAAGAAGACAATGAGAACTTTCTCCACAAGATGAGAGACAGAATTGATAGGGTTGGAATTGAGATTCCTAAGATTGAAGTCAGGTTTGAAAATTTATCAGTTGAAGGAGATGCTTATGATGGAACCAGGGCCTTGCCAACACTAGTCAATGCTACCCTGAATGTAATAGAGGGACTTTTGGGCTATATCAAGATTTTGGCATTTAAGAAAAGGGTTGCCAAGATACTCAAAGATGTTAGTGGAATTATAAAACCATCAAGAATGACTTTATTATTGGGACCTCCAAGTTCAGGAAAAACTACACTTCTTCAGGCACTTGCTGGGAAATTGGACAAGGATCTAAGGGTATCAGGAAGAGTCACTTACAATGGTCATGAACTGTCAGAATTTGTTCCTCAAAGAACATGTGCTTATATTAGTCAGCATGATCTTCACCATGGAGAAACGACAGTGAGAGAGACGCTGGACTTCTCCGGACGCTGCTTGGGAGTTGGAACAAGGTATGATATGTTGACAGAATTGTCAAGACGTGAAAAAGCAGCAGGTATCAAACCAGATCCTGAAATAGATGCTTTCATGAAAGTAACATCAATGGAAGGTCAAGAAACAAGTCTTGTTACAGATTATATTCTCAAGATTCTTGGGTTGGAAACGTGTGCTGATATTTTGGTGGGAGATGAAATGAGAAGGGGCATATCTGGTGGACAAAAGAAGCGTTTAACCACTGGTGAAATGTTAGTAGGACCTGCAAAAGCACTCTTTATGGATGGAATTTCAACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTCAGGTTTATGAGGCAAATGGTTCATATCACGGATGTCACTATGATAATCTCACTTCTGCAACCTGCACCAGAAACATACAACCTTTTTGATGACATAATATTACTTTCAGAAGGTGAGATTGTCTATCAAGGTCCCAGGGAGAGTGTTCTAGATTTTTTTCAAAATGTGGGCTTCAAATGCCCAGAAAGGAAAGGAATTGCAGACTTTTTACAAGAGGTAACTTCTAGAAAGGATCAAGAGCAGTACTGGTTCAGAAGGGACATACCTTATGAATATGTTAGTGTGCCTGATTTTGTAATCCACTTCAACAATTACAGTATTGGTAGAGAACTTCATGAAGAGATTAAAACTCCATTTGATTCTAGTAAAGCTCATCATGCTGCATTAGTAAAGGAAAAGTTTGGAATCTCCAAATGGGAACTCTTCAAGGCATGCTTTTCAAGAGAATGGCTATTCATGAAGCGCAGCTATTTTGTATATATATTTAAGACTTTTCAGATTACAATCATGTCTTTAATTACCATGACAGTGTTTTTTAGAACAAGAATGGAGCACGGTAAACTTGAGGATGGAGGAAAATATTACGGTGCACTGTTTTTCAGTCTTATCAATGTGATGTTCAATGGAGCAGCAGAACTTGCAATGACTGTTAACAGACTTCCTGTTTTCTTCAAGCAGAGAGATTTCCTATTTTATCCAGCATGGGCTTTTGCATTGCCCATTTGGGTCCTCAGAGTTCCTCTCTCTATAGTGGAATCAGTATTATGGATCATCCTCACTTATTATACTATTGGTTTTGCTCCAGCACCTAGTAGGTTTTTCCGTCAACTACTGGCATTCTTCTGTGTGAACCAAATGGCCCTATCTCTTTTCCGGTTCATTGCTGCAATTGGAAGGACAAGAGTTGTGGCTAATACATTTGCTTCCATAACAATTTTAGTTATTTTTGTCCTAAGTGGATTTACTGTTTCAAGAGATGATATTGATCCATGGATGATATGGTGCTATTATGCTTCACCTATGATGTATGGAATGACTGCAATAAGCATCAATGAATTTCTAGACAAAAGATGGAGTACTCCTAATATCGACCCCAGAATTGATGAACCCACAGTTGGGAAGGCCTTTCTTAAGGCCAGAGGCATATTTACAGAAGACTATTGGTATTGGATATCTATCGGTGCTCTTGTAGGATTTTCTCTATTGTTCAATGTTTGTTTCATTCTCGCTCTAACTTACTTGGACCCATTCAGAAGCTCAAAATCTATCATAGTGGAACAGGAAGACAACAGGGAAAGCACAACGAAGTCCTCCTCAGTAGAAAAAACAACTGGAGAAATGACAGAAAGTTCAGCTTCAAATGTTGAATCGTTTGAAGGTGTTGACATGGAAGTAAGAAACAACACGAATAGCTCAATACCTAAAGCTGCAAAAAATGTAAAATTCAAAAAGGGAATGGTGTTACCCTTTCAGCCTCTGTCACTTGTGTTTGAAAATGTGAACTATTACATCAATATGCCCAATGAAATGAAGACACGAGGAATTGAAGAGAACAGACTCCAACTACTAAGAGACATAAGTGGTGCTTTTAGGCCTGGAATTTTAACAGCATTAGTTGGTGTAAGTGGTGCTGGAAAAACCACTTTGATGGATGTGCTTTCAGGAAGGAAAACTAGTGGTTACATTGAAGGAAGTATCAGCATATCGGGTTATCCTAAGAACCAAGCAACTTTTGCTCGGATTAGCGGTTATTGTGAACAAAATGATATCCACTCTCCCAATATTACAGTTTATGAATCTCTTCTGTTTTCTGCTTGGTTGCGGCTCAGTAAAGAAGTTGATATAGAAACACGAAAGATGTTTATCGAGGAAGTTATAGAGCTAGTTGAGTTACATCAAGTGAGAAATTTCTTAGTCGGCCTTCCTGGAATAGATGGATTATCAACTGAGCAGAGAAAGAGGCTTACCATTGCTGTAGAATTGGTTGCAAACCCTTCCATTATCTTTATGGATGAACCAACGACTGGTCTTGATGCTAGAGCTGCAGCAGTAGTTATGCGTACTGTTAGAAACACAGTTGATACAGGGAGAACTGTTGTGTGCACAATTCATCAACCAAGTATTGATATTTTTGAAAATTTTGATGAGCTGCTTTTGATGAAGACTGGTGGACAAGTGATATATGGTGGGCCTCTAGGTCGAAATTCTGAGAAACTTATAGAGTACTTTGAGGCTATTACAGGAATTCCGAAGATTGAAGATGGATATAATCCAGCCACATGGATGCTGGAGATCAGTTCTCCTGTGGTTGAGTCTCAGCTTGATATAGATTTTGCAGAATTATACAACAAGTCAAGCCTTTATCAAAGGAACCAAGAATTGATAAAGGAACTATCCATACCAGCACCTGGAACAAAGGACCTGTACTATCCATCTAAATACTCCCAATCATTTGTTACTCAATGCAGTGCTTGTTTCTGGAAACAGTATCGTTCCTATTGGAGGAATCCACAGTATAATGCCATCAGATTCTTCATCACAATTGTCATTGGTCTTATGTTTGGACTTATTTATTGGAAAAAAGGAGAAAAGATGCAAAGGGAACAAGACCTTTTGAATCTCGTTGGAGCTATGTATTCATCTGTTATTTTCCTTGGTGCAAGCAACACAAGCAGTGTGCAACCTATTGTTGCAATAGAAAGAACAGTTCTCTACCGTGAAAGAGCTGCTGGAATGTACTCAGAACTGACCTATGCAATTGGTCAGGTAGCAATTGAAGTAATTTATGTTGCAATCCAAAGTTTAATCTATTCCAATATCCTTTACTGGATGCTTGGGTTCCCACCGCAAGTTGAAAATTTCTTTTGGTTCTACTTCTTGATATTCATGTCATTTCTCTACTTCACACTATATGGACTGATGACTGTGGCTTTGACACCAAACCATCAAATTGCTGCAATAGTTATGTCTTTCTTCATCAGTTTTTGGAACCTGTTCTCTGGCTTTCTTATTCCAAGAACGCAAATTCCAATATGGTGGAGGTGGTATTATTGGGCATCGCCTGTGGCATGGACAATATATGGACTGGTGACATCCCAGGTGGGTGACAAGAACAGTCCAATAGAGGTTCCTGGATATAGGCTCATGACAGTAAAAGATTATCTTGAGAGGCGATTGGGTTTTGAACATGACTTCCTTGGATATGTTGCTTTGGCTCATATTGCTTTTTGCCTTCTCTTCCTTTTTGTATTTGCCTATGGCATCAAGTTTTTGAACTTCCAGAAAAGATAA 4407 0.3885 MEAEMVEEDIVRSMSDLRKRVSFGELIRTSASFHEKTKSEINEEQDLKWEALWRLPTYDRMRKGILKQVLDNGKVNYEEVDITKLGVEEKKHLLESIIKTAEEDNENFLHKMRDRIDRVGIEIPKIEVRFENLSVEGDAYDGTRALPTLVNATLNVIEGLLGYIKILAFKKRVAKILKDVSGIIKPSRMTLLLGPPSSGKTTLLQALAGKLDKDLRVSGRVTYNGHELSEFVPQRTCAYISQHDLHHGETTVRETLDFSGRCLGVGTRYDMLTELSRREKAAGIKPDPEIDAFMKVTSMEGQETSLVTDYILKILGLETCADILVGDEMRRGISGGQKKRLTTGEMLVGPAKALFMDGISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYNLFDDIILLSEGEIVYQGPRESVLDFFQNVGFKCPERKGIADFLQEVTSRKDQEQYWFRRDIPYEYVSVPDFVIHFNNYSIGRELHEEIKTPFDSSKAHHAALVKEKFGISKWELFKACFSREWLFMKRSYFVYIFKTFQITIMSLITMTVFFRTRMEHGKLEDGGKYYGALFFSLINVMFNGAAELAMTVNRLPVFFKQRDFLFYPAWAFALPIWVLRVPLSIVESVLWIILTYYTIGFAPAPSRFFRQLLAFFCVNQMALSLFRFIAAIGRTRVVANTFASITILVIFVLSGFTVSRDDIDPWMIWCYYASPMMYGMTAISINEFLDKRWSTPNIDPRIDEPTVGKAFLKARGIFTEDYWYWISIGALVGFSLLFNVCFILALTYLDPFRSSKSIIVEQEDNRESTTKSSSVEKTTGEMTESSASNVESFEGVDMEVRNNTNSSIPKAAKNVKFKKGMVLPFQPLSLVFENVNYYINMPNEMKTRGIEENRLQLLRDISGAFRPGILTALVGVSGAGKTTLMDVLSGRKTSGYIEGSISISGYPKNQATFARISGYCEQNDIHSPNITVYESLLFSAWLRLSKEVDIETRKMFIEEVIELVELHQVRNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTTGLDARAAAVVMRTVRNTVDTGRTVVCTIHQPSIDIFENFDELLLMKTGGQVIYGGPLGRNSEKLIEYFEAITGIPKIEDGYNPATWMLEISSPVVESQLDIDFAELYNKSSLYQRNQELIKELSIPAPGTKDLYYPSKYSQSFVTQCSACFWKQYRSYWRNPQYNAIRFFITIVIGLMFGLIYWKKGEKMQREQDLLNLVGAMYSSVIFLGASNTSSVQPIVAIERTVLYRERAAGMYSELTYAIGQVAIEVIYVAIQSLIYSNILYWMLGFPPQVENFFWFYFLIFMSFLYFTLYGLMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKNSPIEVPGYRLMTVKDYLERRLGFEHDFLGYVALAHIAFCLLFLFVFAYGIKFLNFQKR* 1469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1590 1468 CDD ABCG_PDR_domain2 864 1102 IPR034003 -
Mtr1g1590 1468 Pfam Plant PDR ABC transporter associated 735 796 IPR013581 -
Mtr1g1590 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 175 433 IPR027417 -
Mtr1g1590 1468 CDD ABCG_PDR_domain1 164 416 IPR034001 -
Mtr1g1590 1468 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 29 1468 - -
Mtr1g1590 1468 Pfam ABC-transporter N-terminal 96 152 IPR029481 -
Mtr1g1590 1468 Gene3D - 166 460 IPR027417 -
Mtr1g1590 1468 Pfam ABC-2 type transporter 1192 1404 IPR013525 GO:0016020|GO:0140359
Mtr1g1590 1468 Pfam ABC-2 type transporter 513 725 IPR013525 GO:0016020|GO:0140359
Mtr1g1590 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 161 434 IPR003439 GO:0005524
Mtr1g1590 1468 PANTHER ATP-BINDING CASSETTE TRANSPORTER 29 1468 - -
Mtr1g1590 1468 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 876 1119 IPR003439 GO:0005524
Mtr1g1590 1468 Pfam ABC-2 type transporter 392 489 IPR043926 GO:0140359
Mtr1g1590 1468 Pfam ABC-2 type transporter 1076 1146 IPR043926 GO:0140359
Mtr1g1590 1468 SMART AAA_5 904 1096 IPR003593 -
Mtr1g1590 1468 SMART AAA_5 186 411 IPR003593 -
Mtr1g1590 1468 MobiDBLite consensus disorder prediction 809 825 - -
Mtr1g1590 1468 Pfam ABC transporter 895 1046 IPR003439 GO:0005524
Mtr1g1590 1468 Pfam ABC transporter 177 357 IPR003439 GO:0005524
Mtr1g1590 1468 MobiDBLite consensus disorder prediction 800 825 - -
Mtr1g1590 1468 Gene3D - 878 1116 IPR027417 -
Mtr1g1590 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 76 214 IPR027417 -
Mtr1g1590 1468 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 890 1103 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1590 Mtr-Chr1 20122215 20133273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1590 892 1079 Calmodulin-binding Proteins AT2G36910 27.094 5.51e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1590 K08711 - gmx:100788067 2454.48