Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1585 ATGGAGCAAAAAATATTTTGTTGTCTACTTGTATACAAAAAGTTCAAGCCACACCTAGTCATGGTATTTGGCCAGTTGGGCTATACCTTGTTATATTTTATCACTGAAGCTTCTTTTAATCATGGAATGAGTCCTTATGTGTATGTTACCTATCGCCATGTTGTAGCTGGGTTTGTGATGCTCCCTTTTGCATACTTTCTAGAGAAAAATGTAAGACCAAAGCTGACATTTTCTCTATTTATGGAATTTTTTGTGCTTGCAGTGTTAGGGGTCAGTTTGACATTGAATATGTACTTTGTAAGCTTCAAGTACACTTCTCCAACTTTTATTGCTTCCATGGTCAACTGCATAGCTTCCCTTACCTTCATTATTGCAGTGGCACTCAGGTTTGAGGTTCTTGATCTTAAAAATCCTCATGGTATATCAAAGGTCCTTGGTACCTTAATCTCCTTAGCCGGTGTTATGACCATGACACTATATAAAGGACCTGTTATGAGCAATTTTTGGCGTCCTCTGTTTACTATTCAACCAACAATTGCTTCTTCTGTCAATGAGAAGAGCCAGTTTAAGGGTTCACTTCTCATAGTTTTATGCTGTGTTACATGGTCTTTATGCTTCATTATGCAGGCATCGACTCTAAAAAGATACCCTGCTCAATTATCACTCACGACATGGATGTGCTTTATTGGAGCAGCACAATCAGCTATTTTCACAGTGATAGCAGAACATAATAACCCTTCAGCATGGATTATAGGGCTCAATATTGACTTGTGGTCCACAATATATGGGGGAATTGTTGTGAGTGGTTTGTTGACGTACACTCAACTATGGTGCACCGAGAAAAAAGGACCAGTTTTTGTCACAATGTTTAACCCTCTTAGTACCATATTTGTGGCAATTCTGGCATATTCTGTCCTTGGTGAAAAACTTTATTTGGGCAGCATGATCGGTGCACTTATTGTCATCATGGGACTATACTTGTTACTGTGGGGGAAAGAAGGTGACAGAGAGGTTGATTTCAAGACCAAAGGTAAATTGCAGTGCTATAGTGAAGACCAAGAATGCAAAATATAG 1074 0.3883 MEQKIFCCLLVYKKFKPHLVMVFGQLGYTLLYFITEASFNHGMSPYVYVTYRHVVAGFVMLPFAYFLEKNVRPKLTFSLFMEFFVLAVLGVSLTLNMYFVSFKYTSPTFIASMVNCIASLTFIIAVALRFEVLDLKNPHGISKVLGTLISLAGVMTMTLYKGPVMSNFWRPLFTIQPTIASSVNEKSQFKGSLLIVLCCVTWSLCFIMQASTLKRYPAQLSLTTWMCFIGAAQSAIFTVIAEHNNPSAWIIGLNIDLWSTIYGGIVVSGLLTYTQLWCTEKKGPVFVTMFNPLSTIFVAILAYSVLGEKLYLGSMIGALIVIMGLYLLLWGKEGDREVDFKTKGKLQCYSEDQECKI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1585 357 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Mtr1g1585 357 Pfam EamA-like transporter family 39 157 IPR000620 GO:0016020|GO:0016021
Mtr1g1585 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 332 - -
Mtr1g1585 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Mtr1g1585 357 PANTHER WAT1-RELATED PROTEIN 15 347 - -
Mtr1g1585 357 PANTHER WAT1-RELATED PROTEIN 15 347 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1585 Mtr-Chr1 20087623 20089794 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1585 3 356 Nodulin-like Gene Family AT5G07050 41.096 3.14e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1585 - - gmx:100527877 532.717