Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1575 ATGGGGAGCATGGGCTGCTGCAAGGGTTCTTTCGCAACCCCTCAAGTTGCAACATTGAACAAGAACTCTTCTGCAAATGCTGATGCTTCTAATGCTTTAGTGTCAGAGACATGTTTAACTACTAAAGACTATGAGAGCTTGTTCTTACAAACATCGCCTTCTTCCGTTCTTGAGTTGGATACCTTAGCATCCAATTCGATTGAGAAAGTTGATGTTCCATCAAACAATGCAGCCACTCTTGTTGATGAAGCGAGTGAAATGCTGACTTGTCAACCTCAAGAGCTAAAAATTCCAAATCTGAGTGTTTTTAACTTGCCTGAGCTAGTTGCTGCTGAGAATTCAATTGGCACTGACCCCAATCTTGGTTTGGGATTTGATTTAGATCGATTTAACATTGATGATTTTGGATCAGATTTTGAAGAATTTGGTGACTTAGGTGACTTTGAGGATATTCAAGTTCATGGTTTTGATGACAATGAACCTAGTGAGCTTCCTGATTTTGATTTTGGTGATATTGGTGATGATGATGAATTTGTTGGTTGGATTGAAGAGCCCTTCCAAGACAACATATCTTATCTCCATGTTTTGTAG 591 0.3942 MGSMGCCKGSFATPQVATLNKNSSANADASNALVSETCLTTKDYESLFLQTSPSSVLELDTLASNSIEKVDVPSNNAATLVDEASEMLTCQPQELKIPNLSVFNLPELVAAENSIGTDPNLGLGFDLDRFNIDDFGSDFEEFGDLGDFEDIQVHGFDDNEPSELPDFDFGDIGDDDEFVGWIEEPFQDNISYLHVL* 197
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mtr1g1575 Mtr-Chr1 19984429 19985019 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1575 57 174 AP2-EREBP Transcription Factor Family AT1G68550 30.282 1.10e-06 46.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1575 - - mtr:MTR_1g050435 360.147