Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1537 ATGGGGTCGGTGGAGAAATACCACGTAATCGAGCTCGTCGGCGAGGGTTCCTTCGGTAAAGTCTACAAAGGCCGACGCAAACACACCGGACAGACTGTTGCGATGAAGTTCATCATGAAACACGGTAAAACGGAAAAGGATATTCATAATTTGAGACAAGAAATTGAGATATTGAGGAAGTTGAAGCATGAAAATATTATACAAATGCTTGATTCATTTGAAAGCCCACAAGAGTTTTGCGTTGTCACCGAATTTGCACAGGGTGAGCTATTTGAGATTCTCGAGGATGACAAATGCCTTCCTGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTAAGAGCCTTACATTATTTGCATTCCAACCGGATCATCCACCGTGATATGAAGCCTCAAAATATTCTCATTGGTTCCGGATCGATTGTCAAGCTTTGCGATTTTGGGTTTGCACGTGCGATGTCCACAAACACAGTTGTTTTGCGATCTATAAAAGGCACCCCATTATACATGGCTCCAGAACTTGTCCGGGAACAGCCTTACAACCACACTGTAGATTTATGGTCTCTTGGTGTTATATTGTATGAGTTATTTGTAGGACAACCACCATTTTACACAAATTCTGTTTATGCTCTAATCAGACACATTGTTAAGGATCCGGTTAAATATCCTGATAGCATGACTACAAATTTCAAAAGCTTTTTAAAGGGTTTGCTTAACAAGGCACCAGAAAGTCGACTAACTTGGCCTGCTCTTCTTGAACACCCATTTGTTAAAGAAACTAACGACGAAATCGAGGCCAGGGAATTGCATGAGATAAGCGGTTCACCAAGGGACAACAACACACCACAGAGGGTTGAAGGGAAAACCATTCAAACTTCATCAGGCAAAAACACTCACACAACATGTTTGGAGGAGCATATTGCTTCACCACTTAAGAATGAAGCTCAGTTAAATGGCCCTAACATGAACAAAACCAATTCTAAAGTGCTTGATGAGTCTTCCGGATTTTCAAATCAAAATGATGTAGGAGAGTCAGGCTGCCAAAGACTTGACAGACTTGAAAGTAACTCTCGCACCGTCAAAGGTGCAACAGTAATTGGTCAAGACAATGAAGCATTGGGACATATTCTGCAACCACTGAAAAAATGGTCAAAGGGAACTCAAAATATTTGCCGTGATCAAGATCTTCCTGCTTCAAACCAGTCATTGAGAATACTATCAAATCTAGTTGCTGCTGGTGTCTTCAGTTCTCCTGGACACATTGATGAATTAATAAGCGAGCTTCTTTTATTTACAAAATCTGTTGTAGCAATGAAATCTGATGAAGTTTTTGACTTGTTAACAAAGGGTTTCTCTATCACTAAAATTTTGCTAGATAATGGCGGGAGTTTCTTTTCAAGCTCATATTCAAATCACTGGGTTGAATTGGTTCATATCTATTCCCAGGTTGTAACTTTGATAAATGATGCATCTGGAAGAGTTTTGTATGAGTCTAGTGCCTGTGTTACAGTCATGTTGTCTAAAGTTACTCAAGTGCTTAGATCATCTCAAATTTCAGGCTCAGAGACACTGAATGAAACAGCTAATAGAATTATAGATCATGCGAAAACTTCTGGTTTAGTGGACCATTTGTGCCAGTGCTTAGCAACTTCAGGCTCAAGTCTTATTGCCGGTTCTTCAAATATGCTACGGGCTGCTTCTGAAGCATGCAGAGCTGCCTGGTCATTGATTAATGCTATGGACGTTCTTTTTATGAAAAAAAGTGCCATTTTGTTTCCCATCAGTGCATTGCAGCGTCATTTTTTGCAGAGGACAGAAATTATGGATCACAGACAAGATCCCTTGTTTGACGAAGAATCAACAAAAATGGTTGATGCAATGACACGAGCATTCCTGAGAACCAAAGCTGTTCAGGTTGCTGTATACTATTGTTTTCACCAACGTATTGAGTCTGCAACGATTTGTGGTCTTCAGCTTTTGTCAAGGTGCTGCCTCCACAGTGGAATTGTTCCAGCTGTCCTTTGTGGGCTTCCCAGTTCCCTTCCTGTGACTACTGTTGTTAGTGGTGGCGGTGATGGCACTATTGTTTCAGAGATTTTCTCAGTTTTGTCAATATGCAGTTCCTCTCTTAACAAAGATGCACACAGTGTCGAACCAAGTAATACTAAATGTAAATTAGCAAATCCTTCTGCTCTGATTCGTCATTCATGTCTCATTCTTACAATAATTGCACAACATTTGAAGTCAACTGGAAGAAATTCTGCAATTTTTATGCTCACCAACTCACCAAAGAAGCAGCTTGCTCGACTCTCAGTTCTTGCTCATCATGTTTCTTATGATGATAAAACAAAAGCCTCTTTCCAACTTCAAAGTGCATCAGCCATGTTGGCTTTGTCATCCGTTCTTTCCCTCGAACATGGGACTTTGGTTGAGTCTCCGATATCTGAAATTGCTATGCCCTTAATTCCTCGAACTTCTACACTAAGTGACCACCTTAAATTTTCATCAGGAAAAGAAAATGAACTGGACCCTGGTAATTTCAATGGGAAGCTTCCATATTGGCTAGGGATAAGAGATGGGTGTGTTGGTCTTTTAGATTCCAAACTCAAGTGGGGAGGACCATTAGCTGTTCAGCAGTTATGTGCTAGTGGTATACCTCTTCTTCTTATCGGCTTGTTAAGCAATGGGTTTTCAAATGCCTCTCAAGAAAACGAGTGCCTAAACAATAGAATTGGATTATCTCCTATAGGTGTTGTGTGGACAATTTCATCATTATGTCACTGTCTCTCTGGTGGTGCTATGATTTTTCGTCAGATTTTGATTAGGAATGAACATGTTAAGCTCATATCCAACTTAATATGTGATGCTCATCTTAAGTTGATAAAAAGCTGGACCGGACCTGGTGGAGGGAGAGCCGGAGTTAGAGATCTAATAAATGCAGTCATAGATCTCTTAGCATTTCCTTTTGTTGCTCTTCAAAATGCCCCTGGCTTGCCATCAGCCAATGCTTCTGTCAGCAGTGGGTTTCTTCTTAACGTCGGTTCCCCTGGTCAGAGAGTATGCATGGAAGACAAGGATACAGTTAAGGCAATAGAAGAAGACATGGGCAAATACATTAAGATCCTTGTGGAGGTTGGTGCGCCTAGTATTATCCTTCGATGCCTAGATCATATGGAATTGAACGATTTGGGAAGGCCTGTGGCCTTTCTTGCTAAAATGGTGTGCCAACGACCTTTAGCAGTCCAACTTGTGAGTAAAGGTCTTTTGGATCCAAATAGGATGAGAAGGTTCTTTGATCTGTCGGGACTAAAAGAGGTTATGCTGGATGCACTTATGATAATTTCTGATCTTGCTCGTATGGACAAGGGATTCTATGAGTACATTAAAGGTGCTTCTATTTTGGAGTTCTTAAAAAGTTTTCTTTCACATGAAGATCCAAATATGCGTGCAAAAGCTTGCAGTGCTCTTGGAAACATGTGTCGTCACAATGCCTATTTTTACAGTTCTCTTGCAAGATATCAAATCGTTGGTATCCTTATTGATCGATGCTCTGATCCAGACAAACGAACAAGGAAGTTTGCTTGTTTTGCTATTGGAAATGCGGCGTACCACAATGACGTGTTGTATGAAGAGCTGAGGAGGTCAATTCCTCATTTGGCAAATTTGTTGCAAATGGCAGAGGAGGACAAGACCAAGGCAAATGCAGCAGGTGCACTTAGCAATCTGGTTCGCAACTCTGACAGACTTTGTGAAGACATTGTGTCTAAAGGAGCTGTTCAGTCTCTCCTGAAGTTAATTTCCGATTATGCGGTATCAGCACTAAATCCAAGCAGAAATGATTCAACAAACGAGTCTCCTTTGAAGATCGCTCTCTTTTCCCTAGCAAAGATGTGTGCGCATCCACTCTGCAGACAGTTCATCCGTTCATCACCTTTGTTCCCTGTAATTGGAAGACTTCAGCAGTCTCCAGAATCATCCATTGCCAAATATGCATCCGTGATCATTAGCAAAGTTGCTGAAGTCTAG 4026 0.4103 MGSVEKYHVIELVGEGSFGKVYKGRRKHTGQTVAMKFIMKHGKTEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGSGSIVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDSMTTNFKSFLKGLLNKAPESRLTWPALLEHPFVKETNDEIEARELHEISGSPRDNNTPQRVEGKTIQTSSGKNTHTTCLEEHIASPLKNEAQLNGPNMNKTNSKVLDESSGFSNQNDVGESGCQRLDRLESNSRTVKGATVIGQDNEALGHILQPLKKWSKGTQNICRDQDLPASNQSLRILSNLVAAGVFSSPGHIDELISELLLFTKSVVAMKSDEVFDLLTKGFSITKILLDNGGSFFSSSYSNHWVELVHIYSQVVTLINDASGRVLYESSACVTVMLSKVTQVLRSSQISGSETLNETANRIIDHAKTSGLVDHLCQCLATSGSSLIAGSSNMLRAASEACRAAWSLINAMDVLFMKKSAILFPISALQRHFLQRTEIMDHRQDPLFDEESTKMVDAMTRAFLRTKAVQVAVYYCFHQRIESATICGLQLLSRCCLHSGIVPAVLCGLPSSLPVTTVVSGGGDGTIVSEIFSVLSICSSSLNKDAHSVEPSNTKCKLANPSALIRHSCLILTIIAQHLKSTGRNSAIFMLTNSPKKQLARLSVLAHHVSYDDKTKASFQLQSASAMLALSSVLSLEHGTLVESPISEIAMPLIPRTSTLSDHLKFSSGKENELDPGNFNGKLPYWLGIRDGCVGLLDSKLKWGGPLAVQQLCASGIPLLLIGLLSNGFSNASQENECLNNRIGLSPIGVVWTISSLCHCLSGGAMIFRQILIRNEHVKLISNLICDAHLKLIKSWTGPGGGRAGVRDLINAVIDLLAFPFVALQNAPGLPSANASVSSGFLLNVGSPGQRVCMEDKDTVKAIEEDMGKYIKILVEVGAPSIILRCLDHMELNDLGRPVAFLAKMVCQRPLAVQLVSKGLLDPNRMRRFFDLSGLKEVMLDALMIISDLARMDKGFYEYIKGASILEFLKSFLSHEDPNMRAKACSALGNMCRHNAYFYSSLARYQIVGILIDRCSDPDKRTRKFACFAIGNAAYHNDVLYEELRRSIPHLANLLQMAEEDKTKANAAGALSNLVRNSDRLCEDIVSKGAVQSLLKLISDYAVSALNPSRNDSTNESPLKIALFSLAKMCAHPLCRQFIRSSPLFPVIGRLQQSPESSIAKYASVIISKVAEV* 1342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1537 1341 PANTHER PROTEIN KINASE RELATED 1 1340 IPR045193 GO:0004674
Mtr1g1537 1341 ProSitePatterns Protein kinases ATP-binding region signature. 13 40 IPR017441 GO:0005524
Mtr1g1537 1341 MobiDBLite consensus disorder prediction 269 298 - -
Mtr1g1537 1341 SMART arm_5 1245 1299 IPR000225 GO:0005515
Mtr1g1537 1341 SMART arm_5 1121 1161 IPR000225 GO:0005515
Mtr1g1537 1341 SMART arm_5 1204 1244 IPR000225 GO:0005515
Mtr1g1537 1341 Coils Coil 1209 1229 - -
Mtr1g1537 1341 CDD STKc_STK36 5 257 - -
Mtr1g1537 1341 Pfam Protein kinase domain 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1537 1341 SMART serkin_6 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1537 1341 SUPERFAMILY ARM repeat 1104 1335 IPR016024 -
Mtr1g1537 1341 MobiDBLite consensus disorder prediction 314 347 - -
Mtr1g1537 1341 MobiDBLite consensus disorder prediction 275 298 - -
Mtr1g1537 1341 Gene3D Transferase(Phosphotransferase) domain 1 2 331 - -
Mtr1g1537 1341 Gene3D - 1037 1338 IPR011989 -
Mtr1g1537 1341 Coils Coil 41 61 - -
Mtr1g1537 1341 ProSiteProfiles Protein kinase domain profile. 7 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1537 1341 SUPERFAMILY Protein kinase-like (PK-like) 5 281 IPR011009 -
Mtr1g1537 1341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mtr1g1537 1341 Pfam HEAT repeats 1135 1239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1537 Mtr-Chr1 19269994 19284708 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1537 4 270 AGC Kinase Gene Family AT3G08720 37.455 3.38e-46 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Mtr1g1537 Pkinase 9.1e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1537 K06228 - gmx:100792102 2184.84