Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1521 ATGGGGAATACATGTGTTGGTCCTAGCATTTCAAAGAATGGTATTATTCAATCATTTTCCGCTGCAATTTGGCGGTCGCAACCGCCTGATGCTGAAGGATCAGTGTCTAATAGAGGATCAGTAAATGAGGGGAGGACTGATAATGAGCCGGAATCTCCTTTGCCTGTTCAAAACAAACCTCCTGAGCAGATAACTATGCCGAAACCGGAAATAAAACAAGAGGCGAAATCAGAACCGGAGTCGGAAAAGGAGAAGAAGAAACACAGGAGACCTTCTGTGAAGAGAAGTTCTAGTGCAGGACTTCGTGTTGATTCCGTGTTGCAGAGAGAAACCGGTAATTTCAAGGAATTCTATAGTTTAGGGAAAAAACTCGGTCAAGGTCAGTTTGGGACAACATTCTTGTGTATCGAGAAAGCAACCGGGTATCAGTATGCTTGTAAATCTATTGCAAAGAGGAAATTGGTAACCGATGAGGATGTTGAGGATGTGAGAAGAGAAATTCAGATAATGCATCATTTGGCCGGTCATCCTAATGTTATATCCATCAAAGGTGCTTATGAAGATGCAATGGCGGTTCATGTTGTGATGGAATTGTGTGCAGGTGGTGAGCTTTTCGATCGGATTATTCAGCGCGGACATTATACTGAAAGAAAGGCGGCTGAACTTATTAGGACTATAGTTGGTGTTGTTGAAGCCTGTCATTCTCTTGGTGTGATGCATAGAGACCTTAAGCCCGAGAATTTTCTCTTTGTTAATCAGCAAGAGGATTCACTACTCAAAACAATTGACTTTGGATTATCTGTGTTCTTTATGCCAGGTGACACATTTATTGACGTGGTTGGCAGCCCATATTATGTTGCCCCTGAAGTTTTGAAAAAGCGTTACGGCCCTGAAGCAGATGTTTGGAGTGCGGGAGTTATCCTTTACATTCTTTTGAGTGGAGTACCTCCTTTTTGGGCTGAAAGTGAACAAGGGATATTCGAACAGGTTTTGCGTGGTGATCTTGACTTCGTTTCAGACCCCTGGCCTGCAATTTCTGAAAGTGCAAAAGATTTAGTAAGGAAAATGCTTGTTCGTGATCCTAAAAGGCGGATGACTGCACATCAAGTATTATGTCATCCTTGGATTCAAGTTGATGGTGTAGCACCTGATAAGCCACTTGATTCCGCCGTATTAAGTCGATTGAAGCAATTTTCTGCTATGAACAAGCTCAAGAAAATGGCTCTTATAGTCATTGCAGAGAGCTTATCTGAAGAAGAATTGGCTGGATTAAAAGAAATGTTCAAGATGATAGATACAGATAACAGTGGCCAAATCACTTTTGAAGAACTTAAAGTTGGTTTGAAAAAAGTTGGTGCTAATCTTAAGGAGTCTGAAATTTATGATTTAATGCAAGCGGCTGATGTAGATAACAGTGGAACAATTGACTATGGTGAGTTCATTGCGGCAACATTGCATATTAACAAGATTGAAAGAGAAGATCATCTATTTGCAGCCTTTTCTTACTTTGATAAAGATGGAAGTGGCTATATTACTCAAGAAGAACTTCAACAAGCTTGCGATGAGTTTGGCATTAAAGATGTTCGTTTGGAAGAGATAATCAAAGAAATCGATGAAGATAACGACGGGCTCATAGATTATAACGAGTTTGCAGCTATGATGCAGAAAGGAAATCTTCCTATGGTTGGTAAGAAAGGTCTAGAAAAATAA 1710 0.4041 MGNTCVGPSISKNGIIQSFSAAIWRSQPPDAEGSVSNRGSVNEGRTDNEPESPLPVQNKPPEQITMPKPEIKQEAKSEPESEKEKKKHRRPSVKRSSSAGLRVDSVLQRETGNFKEFYSLGKKLGQGQFGTTFLCIEKATGYQYACKSIAKRKLVTDEDVEDVRREIQIMHHLAGHPNVISIKGAYEDAMAVHVVMELCAGGELFDRIIQRGHYTERKAAELIRTIVGVVEACHSLGVMHRDLKPENFLFVNQQEDSLLKTIDFGLSVFFMPGDTFIDVVGSPYYVAPEVLKKRYGPEADVWSAGVILYILLSGVPPFWAESEQGIFEQVLRGDLDFVSDPWPAISESAKDLVRKMLVRDPKRRMTAHQVLCHPWIQVDGVAPDKPLDSAVLSRLKQFSAMNKLKKMALIVIAESLSEEELAGLKEMFKMIDTDNSGQITFEELKVGLKKVGANLKESEIYDLMQAADVDNSGTIDYGEFIAATLHINKIEREDHLFAAFSYFDKDGSGYITQEELQQACDEFGIKDVRLEEIIKEIDEDNDGLIDYNEFAAMMQKGNLPMVGKKGLEK* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1521 569 Gene3D Transferase(Phosphotransferase) domain 1 204 400 - -
Mtr1g1521 569 ProSiteProfiles Protein kinase domain profile. 118 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1521 569 SUPERFAMILY EF-hand 416 556 IPR011992 -
Mtr1g1521 569 ProSiteProfiles EF-hand calcium-binding domain profile. 419 454 IPR002048 GO:0005509
Mtr1g1521 569 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 2 63 562 - -
Mtr1g1521 569 MobiDBLite consensus disorder prediction 69 87 - -
Mtr1g1521 569 Pfam EF-hand domain pair 494 555 IPR002048 GO:0005509
Mtr1g1521 569 Pfam EF-hand domain pair 424 484 IPR002048 GO:0005509
Mtr1g1521 569 SUPERFAMILY Protein kinase-like (PK-like) 117 377 IPR011009 -
Mtr1g1521 569 ProSitePatterns Protein kinases ATP-binding region signature. 124 151 IPR017441 GO:0005524
Mtr1g1521 569 ProSitePatterns EF-hand calcium-binding domain. 504 516 IPR018247 -
Mtr1g1521 569 CDD EFh 424 483 IPR002048 GO:0005509
Mtr1g1521 569 Gene3D Phosphorylase Kinase; domain 1 120 203 - -
Mtr1g1521 569 Gene3D - 401 560 - -
Mtr1g1521 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Mtr1g1521 569 ProSiteProfiles EF-hand calcium-binding domain profile. 529 560 IPR002048 GO:0005509
Mtr1g1521 569 MobiDBLite consensus disorder prediction 24 53 - -
Mtr1g1521 569 ProSitePatterns EF-hand calcium-binding domain. 468 480 IPR018247 -
Mtr1g1521 569 SMART serkin_6 118 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1521 569 Pfam Protein kinase domain 118 376 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1521 569 MobiDBLite consensus disorder prediction 24 101 - -
Mtr1g1521 569 PANTHER SERINE/THREONINE-PROTEIN KINASE 63 562 - -
Mtr1g1521 569 CDD EFh 495 555 IPR002048 GO:0005509
Mtr1g1521 569 ProSiteProfiles EF-hand calcium-binding domain profile. 455 490 IPR002048 GO:0005509
Mtr1g1521 569 ProSitePatterns EF-hand calcium-binding domain. 432 444 IPR018247 -
Mtr1g1521 569 ProSiteProfiles EF-hand calcium-binding domain profile. 491 526 IPR002048 GO:0005509
Mtr1g1521 569 CDD STKc_CAMK 117 375 - -
Mtr1g1521 569 SMART efh_1 423 451 IPR002048 GO:0005509
Mtr1g1521 569 SMART efh_1 529 557 IPR002048 GO:0005509
Mtr1g1521 569 SMART efh_1 459 487 IPR002048 GO:0005509
Mtr1g1521 569 SMART efh_1 495 523 IPR002048 GO:0005509
Mtr1g1521 569 ProSitePatterns EF-hand calcium-binding domain. 538 550 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1521 Mtr-Chr1 18893644 18916562 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1521 1 569 EF-hand Containing Proteins AT5G04870 75.453 0.0 927
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr1g1521 Pkinase 2.6e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1521 K13412 - gmx:100797449 994.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3330 7 50464050 50468054 Mtr1g1521 1 18893644 18916562 PCT