Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1502 ATGATTGAATCATTTATCTTCGATATTGTTGATTCACTTCTAGGCAAGCTTGCTTCGTATGCTTATGAACAAGCTTCTCCAGTCTATAGTCTCTATGAAGATCTGCGAAGTATCAAAGACACTTTGTCCATTGTTAAAGGTATGTTGTTAGACGCAGAGGAGACAAAAATCCAATATCATGGGTTCCATGAATGGCGGAGGCAGATACAAAATATCTGCTATGATGCTGAAGATGTATTGGAAAAATTTGAGCTCCAACACAAGCGAAAGCAAGTTCTCAAAGCTTCGTGTAGTAATAGAATGAAGGTACGCCACTTCTTCTGTTCCTCCAATTCACTTGCTTTTCGTCTTAGGATGGCAAAACAAATTAAAGATATTAGGGATAGATTGGATAAGGTAGCAACCGATGGGACTAAGTTTGGACTTGCAACTATTAATGTTGATCCCAGACTCATTGTGCAAAAGAGGGAAATGACTTATCCTGATGTTGATGCTTTGAGTGTAATAGGAAGAGAGAGTGATAGGGAAGAGATTATCAAGCTTTTGATGCAAGCACATCCTCATGGTGATGGTGATGGTGATAAAAGTCTATCTGTTATTCCCATGGTGGGAATTGGTGGCTTGGGGAAGACCACATTGGCAAAGCTTGTTTTCAATGATAAGAGAATAGATGAACTCTTTCAATTGAAGATGTGGGTGTGTGTCTCTGATAATTTTGACATCAGGCAAATAATCATTAAAATCATCAACTCTGCCGTTAATTCAGCTTCTGCTCATATGAGTGGCCTTGCACTCCAAGAAAACATCATCAACTTAGATATTGTGCAACTAGTAAGTCTTCTGAAACAAACACTTTCAAGTCAAAAGTTTTTACTTGTGTTAGATGATGTATGGAATGATGATCGTGCAAAGTGGATCGAGTTGAAAGATTTGATAAAAGTTGGCACAAGAGGAAGCAAAATTATGGTGACAACACGTAATAACTCAATTGCTTCGATGATGGGTAATGTTCCCTCATATGTTTTGCAAGGTCTTTCTTTGAAGGATTGTTTATCTCTATTTGTCAAATGGGCATTCAAGGAAGGCGAAGAAGAAAAATATCCAAATCTAGTAGAGATAGGAAAAGAGATTGTGAAAAAATGCCAAGGGGTTCCACTAGCTGTTAGAACATTAGGAAGTTCCCTATTCTCAAAATTTGATTTAAATACATGGATATTTGTAAGAGATTCTGAGCTGTGGAATTTAAAACAGCAAAAAGATGATATTTTACCTGCACTAAAATTGAGCTATGACCAAATGCCATCCTATTTAAGGCAATGCTTTGCTTATTTCTCCCTTTATCCTAAAGATATTACTTTCTGTAGTTTGGATATTATTGCTCTTTGGGTAGCCCTTGGATTAGTTCAACCCCGGAACGGAAGTGAAAAACTAGAGGATATTGCAAGAGAATATATTGATGAGTTAAATTCACGTTCATTTCTTCAGGATTTCGAAGACAATGGCTGGATTTGTGTATTCAAAGTACATGATTTGGTACATGATCTTTCATTGTATGTTGCTAAAGCGGAGTTTCTAGTGGTAGACTCACATATTCAAAATATACCTGAGCAAGTGCGACATTTATCAATTGTTGAAAATGATTCACTTGGCCATACTTTATTCCCCAAGTCAAGAAATGTGAGAAGTATATTGTTTCCTATTGATGGAGTGGGTCTTGATAGTGAATCTCTTTTGTATAAATGGATATCAAGATACAAATTCTTGCGGCTTTTGAATTTAAGATATTCTTCGTTTGAGTATCTACCAAATTCAATTGCTAAATTAGAGCACATGTGTTTTCTTGATCTTTCTTATAGCAAAAAAATCAAAAGACTTCCCAATTCAATTTGCAAACTCCTAAATTTGCAAGTTTTGCTTTTGACCGGATGCACAGAGCTTGAAGAAATGCCTAAAGGATTAGGGAAGTTGATTAGCCTACGGCAACTAATGATAACGACAAAACAATCTGTCCTTTTAGATAATGAATTTGCAAGCTTGAACAATCTTCATACTTTGGGTTTTCATTTTTGTGACAATTTGAAGTATTTATTCAGCAGGGAACAAACACAATTCACTTCCCTTGAAACATTGGCTCTTCACTCATGTAAGAGCTTTGACTCCTTGACTCTTGATAATTTTCCTAAATTACAAAATCTATTCATTAGAGGTTGTGAAAAATTAAACTTGTCGTTGAAGAACGACAGTGCAATCCAAAGGTTGAAGATGAAACATTTGTATATTTGGGAATTTCCAAGTTTTCTAACATTGCCTCGATGGGTTTTAAGTGTTGCAGACATTTTAGAGACCTTAGTAATTTATAATTTTCCAAATCTTGAGATGCTTCCTGAGTGTCTAACAACAATGTCTCATCTTAAAAGGCTCCATATTGGTAATTGTCCTAATCTGTTGAATCTTCCAAGTGACATGCTTCGACTCACTACCATCGAAAAATTGTACATAGAAGGCTGTCCTGAATTGTGTAGAAAATGTCAGCCACAAGCCGGTGAGTACTGGCCTATGATTGCACACATCAAGCATGTTTTCATTCAAGAACCAAGAGGATAG 2604 0.3621 MIESFIFDIVDSLLGKLASYAYEQASPVYSLYEDLRSIKDTLSIVKGMLLDAEETKIQYHGFHEWRRQIQNICYDAEDVLEKFELQHKRKQVLKASCSNRMKVRHFFCSSNSLAFRLRMAKQIKDIRDRLDKVATDGTKFGLATINVDPRLIVQKREMTYPDVDALSVIGRESDREEIIKLLMQAHPHGDGDGDKSLSVIPMVGIGGLGKTTLAKLVFNDKRIDELFQLKMWVCVSDNFDIRQIIIKIINSAVNSASAHMSGLALQENIINLDIVQLVSLLKQTLSSQKFLLVLDDVWNDDRAKWIELKDLIKVGTRGSKIMVTTRNNSIASMMGNVPSYVLQGLSLKDCLSLFVKWAFKEGEEEKYPNLVEIGKEIVKKCQGVPLAVRTLGSSLFSKFDLNTWIFVRDSELWNLKQQKDDILPALKLSYDQMPSYLRQCFAYFSLYPKDITFCSLDIIALWVALGLVQPRNGSEKLEDIAREYIDELNSRSFLQDFEDNGWICVFKVHDLVHDLSLYVAKAEFLVVDSHIQNIPEQVRHLSIVENDSLGHTLFPKSRNVRSILFPIDGVGLDSESLLYKWISRYKFLRLLNLRYSSFEYLPNSIAKLEHMCFLDLSYSKKIKRLPNSICKLLNLQVLLLTGCTELEEMPKGLGKLISLRQLMITTKQSVLLDNEFASLNNLHTLGFHFCDNLKYLFSREQTQFTSLETLALHSCKSFDSLTLDNFPKLQNLFIRGCEKLNLSLKNDSAIQRLKMKHLYIWEFPSFLTLPRWVLSVADILETLVIYNFPNLEMLPECLTTMSHLKRLHIGNCPNLLNLPSDMLRLTTIEKLYIEGCPELCRKCQPQAGEYWPMIAHIKHVFIQEPRG* 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1502 867 Gene3D - 9 124 - -
Mtr1g1502 867 SUPERFAMILY L domain-like 507 853 - -
Mtr1g1502 867 Gene3D - 345 428 IPR042197 -
Mtr1g1502 867 CDD RX-CC_like 9 134 IPR038005 -
Mtr1g1502 867 Gene3D Ribonuclease Inhibitor 523 852 IPR032675 -
Mtr1g1502 867 Pfam NB-ARC domain 194 431 IPR002182 GO:0043531
Mtr1g1502 867 PANTHER DISEASE RESISTANCE PROTEIN RP 6 791 IPR044974 GO:0006952
Mtr1g1502 867 Gene3D - 429 517 IPR036388 -
Mtr1g1502 867 Gene3D - 154 339 IPR027417 -
Mtr1g1502 867 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 443 IPR027417 -
Mtr1g1502 867 PRINTS Disease resistance protein signature 199 214 - -
Mtr1g1502 867 PRINTS Disease resistance protein signature 284 298 - -
Mtr1g1502 867 PRINTS Disease resistance protein signature 381 395 - -
Mtr1g1502 867 PRINTS Disease resistance protein signature 702 718 - -
Mtr1g1502 867 PANTHER NBS-LRR DISEASE RESISTANCE PROTEIN 6 791 - -
Mtr1g1502 867 Pfam Rx N-terminal domain 10 101 IPR041118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1502 Mtr-Chr1 18606442 18609084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1502 204 839 WRKY Transcription Factor Family AT5G45050 22.206 3.67e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1502 - - mtr:MTR_7g091140 1164.06