Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1500 ATGGCTCTGGAACTTGTTGCTGGACCTTTAATGGGGGCTGTTTTCAATGTGTTGTTTGAAAGGATAGCTTCTTCTGAGGTTGCAAACTTCTTTAAGAAGAAAAAAAGTGAGAATTTGCTCAAAAGATTGAAGATCATGTTGTTGTCAGTCCATGCTGTGCTCAATGATGCAGAAGAAAAGCAAATGAAAAATGAAGCAGTGAAGGAGTGGCTTGAAGAACTTAAAGATGTTGCATTTGATGCTGATGATCTACTTGATGAGATTTTTACCGGTGAAAAGATTAAGTCAAGAGAGGTAAACTCATTTCACTCCCCTCATACAAATTTTTATGATAAACAACTTGAACAGAAGATAGAAGATGTTTATGAAAGATTAGAGTTTGTTATAAAGTTGAAAGAAGTACTTGATTTGAAGGTGGGTAAGGAAGTGAAAGTGACACACAAGACACCAACCTCATCTGTAGTTGAAGCATGTGATGTGTATGGAAGGGATAATGATAAAGATATCTTAGTTAATTTGCTTTTGTCTCATGATTCTGATGATGAAAAACTAGGTGTTATTCCCATTGTTGGTATGGGAGGAATTGGAAAAACCACCTTAGCTCAACTAGTGTATAATGATGATAGAGTACAGAAGGAGTTTGATCTCAAAGCTTGGATTTACGTCTCGGAAGAATTTGACATCTGCAAGATCACAAAGAACCTTTTGGAGGTTATCACTTTGTGTAGTTGTGATGTTGAAGATTTAAATTCAATACAGAGGAATCTTAAAATGTATATACAGAAGAAAAAGTTTTTATTTGTTTTGGATGATGTTTGGGATGAAAACTATGAGAACTGGGACAAATTCAGGAGTCCATTTAAACATGGAGGGGCTAACGGAAGTAAGATTATCGTAACCACTCGAAGTCGGAATGTTGCATCTATTATGCAGACTTTTCCGCCTTATAATCTTACTGAATTGGCCAATGAAGATTGTTGGGAATTGTTTTCGAACCATGCGTTTGGTTATGGCCATAAGGATTCAAATGTTCATCAGCAAAGTGTATACAAAGTTGGAAGGGAAATAGTTAGAAAGTGCAAGGGATTGCCTTTGGCTTTGAAGACACTTGCAGGACTTTTGAGATCAAAAAGTGATATTCAAGAATGGCATAAAGTACTGAACAGTGAGATATGGGATCTACAACATCATGAGAGTAATATTCTTCCAGCTTTGAGGTTAAGCTACCATTATCTCCCTTCTCATTTAAAGAGATGTTTTGCTTATTGTGCAATTTTCCCAAAAGATTATGAATTTGAAAAGGAGAATATAATTTTGCTGTGGATGGCAGAAGGGTTGCTCCACCAATCAAAAAGACATGGAAGAATTGAAGAAGTTGGAAATGAGTATTTTTGTGAATTAGTATCCAGATCATTTTTTTACCAATCAAGAAGTGGCAAGTCATATTTTCTAATGCATCATCTTATAAACGACCTGGCTCAATTTGTATCTGGAACATTTTCTGTGAGAATAGAAGATAACAATTCTGATCAAGTTATGGAAAGAACTCATTATTTGTCTCACATTATTTCACATTGTTCCTCATATGTAAACCTGAAAGATGTTAGCAAAGCAAATCGCCTACGTACCTTTATGCAAATAAGAACAGTAGGTACATCGATAGACATGTTCAACGACATGCCGAATGATCTTTTGACAAAGCTAAGGTACTTAAGGGTGTTAACCCTGGTAGGTGCTTATTTCTACAGTTTACCTGATTCAATAGGTGAACTAAAACATCTGCGTTCTCTAGAAGTGTCTGACACCGAGATTACAAGGTTACCTGAGTCGATCTGCAGTCTGTACAATTTACAAACGCTCAAGTTAGTTGGATGTTATAATCTTATTGAACTTCCAAAAGATATTCATAAACTTGTCAACTTGCGCTACTTGGATATTCGAAGCACTTGTTTGAAGTGGATGCCATTGCAAATCAGTGAATTGAAAAACCTTCAAAAGTTGAGTGACTTTTTTGTTGGTGAAGATCATGGATCTTCCATTAGTGAACTGGGAGAGCTATGTAATTTACATGGATCATTGTTCATTCATGACATAGAACATGTTGTCAATTACAAGGATTGTGAGAAAGCAAAATTGAATGAAAAACATGGCCTTGAAAAATTGTCTTTGGATTGGGGTGGTAGTGGTGATACCGAAAACTCACAGCATGAAAAGACTAAACTGTGCAGTCTCGAACCGCACACAAATTTGAAGGAGCTTGATATCAACGACTATCCAGGCACAGAATTTCCGGATTGGTTAGGGGACTACTACTTTTGCAACCTGGTTTCCTTAAAGCTTAAGGGATGTAAATATTGCTACAAATTGCCTCCACTTGGACAACTTCCAATGTTGAAAGAGCTTCAGATTATTAAATTTGAAGGATTAATGAGTTTAGGACCCGAGTTTTATGGAAATACAACTTCTGCCAGTACTGATAGCTTTCCTGCACTAGAAATTCTACGGATCGAGTCTATGTCAGCATGGGAGAAATGGTGTTTCGATGCAGAAAATGTAGGCAGCAGAGCTTTCTCTCATCTTAGAGAGTTTTATATTGAAAACTGTCCCAAACTGACAGGGAACTTACCAAGTAGTCTTCCGTCTTTGACATTACTTGTTATCAGAGATTGCAAACGTTTGCTTTGTCCACTTCCCAAATCTCCGAGTCTGCGAGTGCTCAACATTCAGAATTGTCAGAAACTAGAATTCCATGTACATGAACCTTGGTACCACCAATCACTGACATCTCTGTACTTGATTGATAGCTGTGACTCACTCATGTTCTTGCCTTTAGATCTTTTCCCAAACCTCAAGTCCCTAGATATTTGGGGATGCAAAAATCTGGAAGCAATCACTGTTCTATCAGAATCAGATGCAGCTCCTCCAAATTTCAAATCCCTCAATTCCATGTGCATAAGGCATTGTCCAAGTTTCACATCATTTCCCAAGGGAGGATTTGCAGCCCCAAAGCTCAACTTGTTAACCATAAATTACTGTCAGAAGTTGATTTCTTTGCCTGAAAATATGCATGAGTTTATGCCAAGCTTGAAAGAACTTCAGCTGAGGGGTTGTCCACAGATTGAGTCATCTACTACGAGGCCACTCAGGATTCGGATTTCCAACAAATTCATGGAAGGGAAACAAAATCATTCTGATCCTATCTTTGCAAGGTTGGAAGGTCTTGCCTCTGTTAATAGTCCCTCTTCAAGTTAG 3252 0.3755 MALELVAGPLMGAVFNVLFERIASSEVANFFKKKKSENLLKRLKIMLLSVHAVLNDAEEKQMKNEAVKEWLEELKDVAFDADDLLDEIFTGEKIKSREVNSFHSPHTNFYDKQLEQKIEDVYERLEFVIKLKEVLDLKVGKEVKVTHKTPTSSVVEACDVYGRDNDKDILVNLLLSHDSDDEKLGVIPIVGMGGIGKTTLAQLVYNDDRVQKEFDLKAWIYVSEEFDICKITKNLLEVITLCSCDVEDLNSIQRNLKMYIQKKKFLFVLDDVWDENYENWDKFRSPFKHGGANGSKIIVTTRSRNVASIMQTFPPYNLTELANEDCWELFSNHAFGYGHKDSNVHQQSVYKVGREIVRKCKGLPLALKTLAGLLRSKSDIQEWHKVLNSEIWDLQHHESNILPALRLSYHYLPSHLKRCFAYCAIFPKDYEFEKENIILLWMAEGLLHQSKRHGRIEEVGNEYFCELVSRSFFYQSRSGKSYFLMHHLINDLAQFVSGTFSVRIEDNNSDQVMERTHYLSHIISHCSSYVNLKDVSKANRLRTFMQIRTVGTSIDMFNDMPNDLLTKLRYLRVLTLVGAYFYSLPDSIGELKHLRSLEVSDTEITRLPESICSLYNLQTLKLVGCYNLIELPKDIHKLVNLRYLDIRSTCLKWMPLQISELKNLQKLSDFFVGEDHGSSISELGELCNLHGSLFIHDIEHVVNYKDCEKAKLNEKHGLEKLSLDWGGSGDTENSQHEKTKLCSLEPHTNLKELDINDYPGTEFPDWLGDYYFCNLVSLKLKGCKYCYKLPPLGQLPMLKELQIIKFEGLMSLGPEFYGNTTSASTDSFPALEILRIESMSAWEKWCFDAENVGSRAFSHLREFYIENCPKLTGNLPSSLPSLTLLVIRDCKRLLCPLPKSPSLRVLNIQNCQKLEFHVHEPWYHQSLTSLYLIDSCDSLMFLPLDLFPNLKSLDIWGCKNLEAITVLSESDAAPPNFKSLNSMCIRHCPSFTSFPKGGFAAPKLNLLTINYCQKLISLPENMHEFMPSLKELQLRGCPQIESSTTRPLRIRISNKFMEGKQNHSDPIFARLEGLASVNSPSSS* 1084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1500 1083 CDD RX-CC_like 47 125 IPR038005 -
Mtr1g1500 1083 Gene3D - 408 495 IPR036388 -
Mtr1g1500 1083 PANTHER OS05G0414200 PROTEIN 23 876 - -
Mtr1g1500 1083 PANTHER OS05G0414200 PROTEIN 880 1043 - -
Mtr1g1500 1083 SUPERFAMILY L domain-like 535 958 - -
Mtr1g1500 1083 Gene3D - 141 313 IPR027417 -
Mtr1g1500 1083 Pfam NB-ARC domain 171 389 IPR002182 GO:0043531
Mtr1g1500 1083 PANTHER DISEASE RESISTANCE PROTEIN RP 880 1043 IPR044974 GO:0006952
Mtr1g1500 1083 PANTHER DISEASE RESISTANCE PROTEIN RP 23 876 IPR044974 GO:0006952
Mtr1g1500 1083 PRINTS Disease resistance protein signature 186 201 - -
Mtr1g1500 1083 PRINTS Disease resistance protein signature 259 273 - -
Mtr1g1500 1083 PRINTS Disease resistance protein signature 360 374 - -
Mtr1g1500 1083 PRINTS Disease resistance protein signature 945 961 - -
Mtr1g1500 1083 Pfam Rx N-terminal domain 11 91 IPR041118 -
Mtr1g1500 1083 Gene3D - 13 124 - -
Mtr1g1500 1083 Gene3D - 320 407 IPR042197 -
Mtr1g1500 1083 Gene3D Ribonuclease Inhibitor 679 893 IPR032675 -
Mtr1g1500 1083 Gene3D Ribonuclease Inhibitor 901 1055 IPR032675 -
Mtr1g1500 1083 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 423 IPR027417 -
Mtr1g1500 1083 Gene3D Ribonuclease Inhibitor 516 678 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1500 Mtr-Chr1 18566958 18570461 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1500 187 494 WRKY Transcription Factor Family AT5G45050 26.498 3.26e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1500 - - ccaj:109812375 1669.44