Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1496 ATGTCTAGGAACATCAAGGAGGGGAAAGTTTTGGCAAAAGGGTATTATGTTATTTTATTGCTGTTGACCTTATTCCTTTTTAGCACAGAGGGGTTGAATTTAGAGGGACAAATCCTCTTGGAAATTAAGAATGGACTTCATGATAAATATAATTATTTGTCAAATTGGAATTCTAGTGATGAAAATCCATGTGGATGGATAGGTGTAAATTGCACTTATAGTGGAAATGGCAGTGATCCAGTGATTGTTTCGCTTAATTTGAGTTCGATGAATCTTTCTGGAACCCTAAATGCTAGCATTGGAGGTCTAACCAATTTAACTTATCTCAATCTTGCTTACAATGGTTTGAATGGAAGTATCCCTAAGGAGATTGGTGAGTGTTTGAGTTTGGAATATCTTTACTTAAACAATAATCAATTTGAAGGATCAATTCCTGTTGAATTAGGGAAACTTTCTGCCTTGAGATATTTGAATATTTGCAACAATATACTCGCTGGTGTTCTTCCGGACGAGATTGGAAAGTTGGCTTCATTGGTTGAGTTGGTTGCTTTTAGTAACTATCTCATTGGCCCTTTGCCGAGTTCGGTTGGAAATCTCGAGAATCTTGTGACTTTCAGAGCCGGGGCGAATAACATTACTGGCAGCTTGCCGAAGGAGATTAGCCGATGTAAGAGCTTAGAACGTCTTGGTCTTGCTCAAAATCAGATAGTAGGTGAGATACCTAGCGAGATTGGGATGCTCGAAAACTTAAAAGAGTTGATTTTATGGGAAAATGAGTTGTCAGGAGTTGTTCCTAAAGAGCTTGGGAATTGCAGTAGGCTTGAGATCCTGGCTTTATATGGGAATAATCTCATTGGACCGTTACCTGGAGAGATCGGGAACCTGAAATCGTTGAAGTGGTTGTATCTTTATAGAAATAATTTGAATGGATCCATTCCAAGGGAAATCGGAAATCTTTCTTCAGCTTTACACATTGATTTCTCGGAGAACTCTTTAGGTGGCGATATCCCTTCGGAGTTTGGCAAAATTCGTGGTTTAAGCTTGCTCTTTCTCTTTGAGAACCATCTAAGTGGTGTTATACCGATTGAGTTTGGTAGTTTGAAGAACCTGTCGAAGCTGGACCTGTCAATAAATAATCTTACTGGTCCGATTCCGCACCGCTTGCAATATTTGACAAATATGGTTCAGTTGCAACTTTTTGACAACTCATTAACTGGTATTATTCCTCAGGGACTTGGACTTTTTAGTCGTCTTTGGGTAGTTGATTTTTCTGACAACAACTTGACCGGAACAATACCTCCTCATTTATGCCGAAACTCTCATTTGATGCTGTTGAATGTAGCAGATAATCAGCTTTACGGAAACATACCGAAAGGGATATTGAACTGTGAATCATTGGCACAGTTGCTGTTGGTCGGTAACAGGCTTACCGGTGGCTTCCCTTCCGAGTTGTGTAAACTTGAGAATCTTACTGCCATTGATTTGAATGATAACAGGTTTAGCGGTCCACTTCCTCGTGAGATCTCAAACTGCCGCAATTTGCAAAGGCTTCATATTGCAAATAATTACTTCACATTGGAGTTGCCTAAGGAAATGGGAAATCTATCTCAATTGGTAACTTTTAATGTTTCGTCAAACCTTTTCACCGGAAGAATCCCCACTGAAATTGTTTGGTGCCAGAGATTGCAGCGCCTAGATCTCAGCAGGAATCGTTTTACCGGTTCTTTGCCAAATGAACTCGGAACACTTCAGCACTTGGAGATTCTAAAACTCTCAGACAATCAGTTGTCTGGAAATATTCCTGCAGCATTAGGCAATCTGTCTCATTTGAACTGGTTGCTGATGGACGGCAATTTGTTTTTCGGCGAAATACCTTCTCAGTTAGGATCTCTTTCGAGCTTACAGATAGCAATGGATCTCAGTTACAATAATCTTTCTGGAAGAATACCGTCTCGGCTCGGCAATCTCAATATGCTTGAGTATCTCTTTCTCAATAACAACCAATTGGATGGTGAAATTCCGAGTACCTTTAGCGCACTTTCTAGCTTGATGGGGTGTAATTTCTCAAACAATAACCTCTCTGGACCAATTCCTTCCACTAAAATTTTCGAAAGTATGGCTGTTAGCAGCTTTGTTGGAGGTAACATAGGTCTTTGCGGTACACCTCTCGGTGACTGCAATAGAATTTCAGCTCCCTGCTCTACTCATCCGGCGAAAGATGCTAATCTTTCCCGTGCTAAAATTGTCATAATCATTGCAGCTACTGTTGGTGGTGTTTCTCTCATTTTGATTTTAGTGATTCTATATTTAATGAGACGACCTCGGGAGGCTGTTGATTCCTTTGCAGACACTGAAACTCCATCTATAGATTCAGATATCTATTTGCCTCCAAAGGAAGGTTTCACATTTCAAGACCTAGTTGAAGCTACAAAAAGATTTCATGAAAGTTATGTTATAGGTAGTGGAGCGTGCGGCACAGTTTATAAGGCAGTGATGAAATCTGGTAAGACGATTGCCGTTAAGAAGTTAGCGTCGAACCGGGAAGGGAACAACGTCGATAATAGTTTCAGGGCTGAAATATCGACACTAGGAAGGATAAGGCATCGGAATATAGTGAAGCTGTACGGATTTTGCTATCACCAAGATTCAAATCTCCTACTTTATGAGTACATGGAAAGAGGTAGCTTAGGTGAATTATTGCATGGTTCTGCAAGTAATTTGGAGTGGCCGACTCGATTCATGATTGCTCTTGGAGCTGCTGAAGGTCTTTCTTACTTGCATCATGACTGTAAACCAAAGATCATTCACCGAGATATAAAATCTAACAACATTCTTCTTGATGAAAATTTTGAGGCCCATGTTGGTGATTTTGGATTGGCTAAAGTGATTGACATGCCTCAGTCAAAATCGATGTCTGCAGTTGCTGGATCTTATGGGTATATTGCTCCTGAATATGCATATACCATGAAAGTTACAGAGAAGTGCGACATATATAGTTACGGCGTTGTACTCTTGGAATTGCTAACCGGAAAAACTCCAGTTCAACCAATGGAGCAAGGAGGAGATCTTGTCACATGGACGAGAAACCATATTCGGAACAATAACAATACACTGAGCTCAGAGATACTCGACACCCGTCTTGATCTTGAAGATCAAATCACTATAAATCACATGCTGACTGTTTTGAAACTTGCTCTAATGTGCACAAGTATGTCTCCAACCAAGAGGCCATCAATGCGCGATGTTGTGTTGATGCTCATTGAGTCAAATGAACGAGAAGGAAACTTAACACTCACTCGAACAAACCACGATGATCCTCATTCTAAAGATAGCACATGA 3339 0.4037 MSRNIKEGKVLAKGYYVILLLLTLFLFSTEGLNLEGQILLEIKNGLHDKYNYLSNWNSSDENPCGWIGVNCTYSGNGSDPVIVSLNLSSMNLSGTLNASIGGLTNLTYLNLAYNGLNGSIPKEIGECLSLEYLYLNNNQFEGSIPVELGKLSALRYLNICNNILAGVLPDEIGKLASLVELVAFSNYLIGPLPSSVGNLENLVTFRAGANNITGSLPKEISRCKSLERLGLAQNQIVGEIPSEIGMLENLKELILWENELSGVVPKELGNCSRLEILALYGNNLIGPLPGEIGNLKSLKWLYLYRNNLNGSIPREIGNLSSALHIDFSENSLGGDIPSEFGKIRGLSLLFLFENHLSGVIPIEFGSLKNLSKLDLSINNLTGPIPHRLQYLTNMVQLQLFDNSLTGIIPQGLGLFSRLWVVDFSDNNLTGTIPPHLCRNSHLMLLNVADNQLYGNIPKGILNCESLAQLLLVGNRLTGGFPSELCKLENLTAIDLNDNRFSGPLPREISNCRNLQRLHIANNYFTLELPKEMGNLSQLVTFNVSSNLFTGRIPTEIVWCQRLQRLDLSRNRFTGSLPNELGTLQHLEILKLSDNQLSGNIPAALGNLSHLNWLLMDGNLFFGEIPSQLGSLSSLQIAMDLSYNNLSGRIPSRLGNLNMLEYLFLNNNQLDGEIPSTFSALSSLMGCNFSNNNLSGPIPSTKIFESMAVSSFVGGNIGLCGTPLGDCNRISAPCSTHPAKDANLSRAKIVIIIAATVGGVSLILILVILYLMRRPREAVDSFADTETPSIDSDIYLPPKEGFTFQDLVEATKRFHESYVIGSGACGTVYKAVMKSGKTIAVKKLASNREGNNVDNSFRAEISTLGRIRHRNIVKLYGFCYHQDSNLLLYEYMERGSLGELLHGSASNLEWPTRFMIALGAAEGLSYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGKTPVQPMEQGGDLVTWTRNHIRNNNNTLSSEILDTRLDLEDQITINHMLTVLKLALMCTSMSPTKRPSMRDVVLMLIESNEREGNLTLTRTNHDDPHSKDST* 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1496 1112 SMART serkin_6 813 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1496 1112 Pfam Protein kinase domain 814 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1496 1112 Gene3D Ribonuclease Inhibitor 465 730 IPR032675 -
Mtr1g1496 1112 Pfam Leucine rich repeat N-terminal domain 34 71 IPR013210 -
Mtr1g1496 1112 Gene3D Ribonuclease Inhibitor 273 344 IPR032675 -
Mtr1g1496 1112 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 4 1097 - -
Mtr1g1496 1112 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Mtr1g1496 1112 SUPERFAMILY RNI-like 324 699 - -
Mtr1g1496 1112 Gene3D Transferase(Phosphotransferase) domain 1 891 1106 - -
Mtr1g1496 1112 Pfam Leucine rich repeat 249 308 IPR001611 GO:0005515
Mtr1g1496 1112 Pfam Leucine rich repeat 561 619 IPR001611 GO:0005515
Mtr1g1496 1112 SUPERFAMILY Protein kinase-like (PK-like) 789 1086 IPR011009 -
Mtr1g1496 1112 Gene3D Ribonuclease Inhibitor 349 460 IPR032675 -
Mtr1g1496 1112 ProSiteProfiles Protein kinase domain profile. 813 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1496 1112 SUPERFAMILY L domain-like 50 405 - -
Mtr1g1496 1112 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1097 - -
Mtr1g1496 1112 Gene3D Phosphorylase Kinase; domain 1 781 890 - -
Mtr1g1496 1112 SMART LRR_typ_2 129 151 IPR003591 -
Mtr1g1496 1112 SMART LRR_typ_2 487 511 IPR003591 -
Mtr1g1496 1112 SMART LRR_typ_2 247 270 IPR003591 -
Mtr1g1496 1112 SMART LRR_typ_2 415 439 IPR003591 -
Mtr1g1496 1112 SMART LRR_typ_2 583 607 IPR003591 -
Mtr1g1496 1112 SMART LRR_typ_2 391 414 IPR003591 -
Mtr1g1496 1112 SMART LRR_typ_2 295 319 IPR003591 -
Mtr1g1496 1112 SMART LRR_typ_2 103 127 IPR003591 -
Mtr1g1496 1112 SMART LRR_typ_2 656 679 IPR003591 -
Mtr1g1496 1112 Gene3D Ribonuclease Inhibitor 187 272 IPR032675 -
Mtr1g1496 1112 Gene3D Ribonuclease Inhibitor 31 186 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1496 Mtr-Chr1 18500766 18505996 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1496 54 1086 Receptor kinase-like Gene Family AT1G73080 37.870 0.0 654
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr1g1496 Pkinase 5.5e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1496 - - gmx:100805792 1739.16