Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr1g1482 | ATGGCGGAAGATATGGAAATTGATCATATTATCGACGTTCCCGATACCCCAGAGAGATCAAATGCAGGAAACAATGATCGAAAATATGTTGGTAATCCGGAGAAGAGGGGTAGGGCCTTTCATGTTCCTAATGAAATAAGTAAATGCAACAAGTATGTAATAATATCCCCGGATAAACCTTCCCCCTCTCAAAATGCCTCCATATTTAGGAGAGCTCAAACTGAGAAAGTTTCTGGTGGACTTGGAACATCACGCTCTAGTAAAGCTGAAATGACGGAGAAAGGGAAAACTGTAAGCTCGAGGATTCCTTCTAAGTCGTCTCACCATGGACATATTTCTGTTTTCGATTTGACTGGAGAGAATGGGCAATTCCAACAACCAAAACCAGCTTTCTCACACCGTGGATCAAGAGATAACACAAATGAAGACAAGAAAGAATTGAAAGCAAGTATTGGGAATACTTCACTACCCTTAATTACTAATTCATCTAATACATCTAGAAATGCTGTCACTGGAAAGTGTAAACTAGATAACACAACACTTCCAGGTTCTAATACTTTTATGGACCGTGGCAAGAGTGTTTCTCTGTCTAATGATTCTCAATCTCAGCCGAAAGCTGAAAAGCAAGTTTCTTTGTCTCCTCGTCTTTCCACTGCTCCAAGAGGTAGAGGGAACAGGAGATTGGTACGAAATGGGTGCATTTCACCACAAAATATTGCAACAAGGGCAAAACAATCAGCTGAACAGAGCATCTTTCAAACCAATAATGTTGAACAGATCTGTGCTGGGCATTCAGTTTCTAGAAATACAATGTCTCCAATTAGTGTTGATGATATTGTTTCTGAAGAGAGACCTGGTGGTAGATTGAAAGGAAAGGGAGTACTTATTCATCCTTCATCAAATGGAACTATTCAGACTGATAGCAGCAGCCCTGTGGTCAATCTTGAAGAGGCCAGTGGTAGCAGTAATATACCAAGAAATGGATATGAAAACTGGGAGAGACAAGGTGGTTGGAGAACTACACATAATGATCAACACTTGTATGATGCGAATGGGCATCATTCGAGGAGAAGTTACGTTGAAAGACTTACTCACAGACAAAATATGAACAGACTGGACAGAAGTGATACTGGGAGCAGTCAAAATGGCAAGGATGTTCCAGCTTCACTGATTATTCCACAGGTAGGTCAGTCAACTGGACCCAGTACTACTGCTGACTCAGCGACTAAAAGGCCAAGGAAACGTGAATCATCTTCTAGAAATCCTAATGTAGCATCTCATAATTCTAAAACTGTATTCGTCAATTCATCCGGGGAATCATCAAGTTCATCCAGAAGTTGTGGCATGGATCCTGAATTAGCTGCGTTGTTATCCATACCAAGTTTCAAAAACGAACTTAATGAAGGTTTAGATGACAATGACAACAATATTTCGGTAGCTCGGGCAATGCAATTAGAAGCAGATGAGAGATTGGCACGTGAACTCCAAGAACAACTATATAATGATGATTATTTTGAAGGCAGTTGGGTTGACGAACATTTAGCACGGGTGCCGCAGGATGCAGGGGGTCTTTTGCACACATCTACTGATAATCATCAGATACCTCATCATACACGTATTCCGGGGGAAAATAGACAGCCCCGTTCACGACCTAATCAAAATCCTTCAAATAGGAGGAGAACTGTGCCTCAAATTCCTCTTTCTAATAGAACGACACTGAGTCGCATGACAACTCGATCGTCAAGACCTACCATATCATCTAGAGGAAGAGGAAGAGGAAGAGGAAGAGCAAGACTCCCTCGGTTTCCTCTAGAGATGGACCTAGACATGAGACTTGATATATTGGAAGCATTAGAGAATGCGGTAGGGGATTTTAATGACCTGGGAATGCCCGATGACATCCGTAATGCTCATCGTGATTTCAATGAAGATGATTATGAAATGTTATTGGCTCTTGATGATCATAATCACCAGCATACTGGTGCATCTACCAATCTGATCAATAGGTTACCACAGTCCACTGTCCAGACTGACAACTACACAGAGGATTGTGCCGTATGTCTCGAGACCCCTGTCAAGGGAGACACCATTCGCCACCTTCCTTGTTTGCATAAATTTCACAAAGATTGTATTGATCCTTGGCTTGGTAGGAAAAGTTCATGCCCCGTGTGCAAGTCATCTATCACCTGA | 2190 | 0.4187 | MAEDMEIDHIIDVPDTPERSNAGNNDRKYVGNPEKRGRAFHVPNEISKCNKYVIISPDKPSPSQNASIFRRAQTEKVSGGLGTSRSSKAEMTEKGKTVSSRIPSKSSHHGHISVFDLTGENGQFQQPKPAFSHRGSRDNTNEDKKELKASIGNTSLPLITNSSNTSRNAVTGKCKLDNTTLPGSNTFMDRGKSVSLSNDSQSQPKAEKQVSLSPRLSTAPRGRGNRRLVRNGCISPQNIATRAKQSAEQSIFQTNNVEQICAGHSVSRNTMSPISVDDIVSEERPGGRLKGKGVLIHPSSNGTIQTDSSSPVVNLEEASGSSNIPRNGYENWERQGGWRTTHNDQHLYDANGHHSRRSYVERLTHRQNMNRLDRSDTGSSQNGKDVPASLIIPQVGQSTGPSTTADSATKRPRKRESSSRNPNVASHNSKTVFVNSSGESSSSSRSCGMDPELAALLSIPSFKNELNEGLDDNDNNISVARAMQLEADERLARELQEQLYNDDYFEGSWVDEHLARVPQDAGGLLHTSTDNHQIPHHTRIPGENRQPRSRPNQNPSNRRRTVPQIPLSNRTTLSRMTTRSSRPTISSRGRGRGRGRARLPRFPLEMDLDMRLDILEALENAVGDFNDLGMPDDIRNAHRDFNEDDYEMLLALDDHNHQHTGASTNLINRLPQSTVQTDNYTEDCAVCLETPVKGDTIRHLPCLHKFHKDCIDPWLGRKSSCPVCKSSIT* | 730 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr1g1482 | 729 | SUPERFAMILY | RING/U-box | 683 | 728 | - | - | |
Mtr1g1482 | 729 | SMART | ring_2 | 684 | 724 | IPR001841 | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 522 | 597 | - | - | |
Mtr1g1482 | 729 | ProSiteProfiles | Zinc finger RING-type profile. | 684 | 725 | IPR001841 | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 284 | 329 | - | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 298 | 329 | - | - | |
Mtr1g1482 | 729 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 543 | 727 | - | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 373 | 407 | - | - | |
Mtr1g1482 | 729 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 650 | 729 | IPR013083 | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 135 | 149 | - | - | |
Mtr1g1482 | 729 | Pfam | Ring finger domain | 683 | 725 | IPR001841 | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 118 | 134 | - | - | |
Mtr1g1482 | 729 | CDD | RING-H2_PA-TM-RING | 683 | 725 | - | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 55 | 229 | - | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 153 | 218 | - | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 363 | 448 | - | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 57 | 88 | - | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 545 | 587 | - | - | |
Mtr1g1482 | 729 | MobiDBLite | consensus disorder prediction | 421 | 448 | - | - | |
Mtr1g1482 | 729 | PANTHER | - | 543 | 727 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr1g1482 | Mtr-Chr1 | 18273373 | 18282024 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr1g1482 | 3 | 729 | C3H Transcription Factor Family | AT1G04790 | 32.212 | 1.47e-75 | 254 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr1g1482 | - | - | cam:101513161 | 845.114 |