Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr1g1461 | ATGTTAGAAACATTCTGTATTGGAATTCTGAAGAAGCTTGATTATGGATTGGTTCATTGCCAGGCTTTGGTTTTGGCCCCAACCATGGAGCTGGTTTTACAGATTAAGGAGGTTATGCAAGATCTTGGTAGATTCCATGGTGTAAAGATTCATGCATGTGTCGGGGGGACAAGTGTTCCGAAGGAGGATCGTCAGCGCTTTCTCAAAGTTGGTGGTGTTCACATTATTGTTGGTACTCCGAGGTGTGTGTATGACATGCTGCAGAGGGGGCGTACTCGCCTAGATTGCATAAAGATGTTTGTTATGGATGAGGTTGATCAAATGCTTTCACTTGGTTTCAAGGATAAGATCGATGAAATCTTCAAGCTACTACCATGCAAAATTCAGGTTGGAGTAATCTCTGCTACAATGCCACCTGAAGCCCTTGAGATTACTAGGAAGTTCATGAAAAAGCCTGTGACAATTCAGGCAAAGCCTGATGAGCTGACCCTTGAGGGTATCAAGCAGTTTTATGTCGATGTTGAGAAGGAAGAGTGGAAGCTAGAGACACTATGCGACATCTTTGAGCTGACCGTTAAAGCTAAATCGATCACTCATTGTATTGTCTTTGTGGATACCAGGTGCAAAGTGGATTGGCTCACGGACAAGATGCAAAGCAGAGATCATAAAGTGTCAGTCATCCAGAGTGACATGGACCAGAACACTAGGGATATCATTGTGCGCGAGTTCTTTTCCCAGTCTGGCTCTCCTCATGTTCTCATTACCACAGACCCCTTGGTTTGTGGTACAGATGTGCATAAAGTATCTCTGATCGTAAACTATGATCTCCCAGCTGCGCCTGAAAACTATCTTTATCGTATAGGCCGCCGGAGTGGGCAATTTGGAAGATGTGTTGCTATAAACTTTATGACAAAGGATGAGGCTACAATGATCATAGATATTCAGAAATTCTACAATATGGTTATAGAGGAGCTGCCATATAATTTTGATGAGTTGCTCTGA | 1002 | 0.4311 | MLETFCIGILKKLDYGLVHCQALVLAPTMELVLQIKEVMQDLGRFHGVKIHACVGGTSVPKEDRQRFLKVGGVHIIVGTPRCVYDMLQRGRTRLDCIKMFVMDEVDQMLSLGFKDKIDEIFKLLPCKIQVGVISATMPPEALEITRKFMKKPVTIQAKPDELTLEGIKQFYVDVEKEEWKLETLCDIFELTVKAKSITHCIVFVDTRCKVDWLTDKMQSRDHKVSVIQSDMDQNTRDIIVREFFSQSGSPHVLITTDPLVCGTDVHKVSLIVNYDLPAAPENYLYRIGRRSGQFGRCVAINFMTKDEATMIIDIQKFYNMVIEELPYNFDELL* | 334 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr1g1461 | 333 | Pfam | DEAD/DEAH box helicase | 5 | 140 | IPR011545 | GO:0003676|GO:0005524 | |
Mtr1g1461 | 333 | Pfam | Helicase conserved C-terminal domain | 180 | 289 | IPR001650 | - | |
Mtr1g1461 | 333 | Gene3D | - | 6 | 162 | IPR027417 | - | |
Mtr1g1461 | 333 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 20 | 314 | IPR027417 | - | |
Mtr1g1461 | 333 | SMART | ultradead3 | 1 | 170 | IPR014001 | - | |
Mtr1g1461 | 333 | Gene3D | - | 163 | 333 | IPR027417 | - | |
Mtr1g1461 | 333 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 166 | 333 | IPR001650 | - | |
Mtr1g1461 | 333 | PANTHER | EUKARYOTIC INITIATION FACTOR 4A-1 | 2 | 333 | - | - | |
Mtr1g1461 | 333 | PANTHER | RNA HELICASE | 2 | 333 | - | - | |
Mtr1g1461 | 333 | SMART | helicmild6 | 211 | 292 | IPR001650 | - | |
Mtr1g1461 | 333 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 1 | 155 | IPR014001 | - | |
Mtr1g1461 | 333 | CDD | SF2_C_DEAD | 167 | 302 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr1g1461 | Mtr-Chr1 | 18021747 | 18023083 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr1g1461 | 4 | 333 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 65.861 | 3.11e-150 | 427 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr1g1461 | K03257 | - | ming:122060600 | 427.943 |