Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1411 ATGAATGAAGATTGGAAGCCAAAAGTAGATATGGTTTTCTGTAGCTTTGAAGATGCTTGGGAGTTCTGGAACACTTACGGTGGTAAGGTTGGATTCGGAGTGAGGAAAGATTATACACACAGAAAAAAGGATGGTTCAGTTTCTTCTTGTAGGTTTGTTTGCTGCAAAGAAGGCATGCGAAAGCCAGACAAGCGAGATTATAAAACAAAGAATCCAAGACTAGAGACCAGAACAAATTGTGAAACAAGGTTAGGACTTAAGAATGTGGATGGAAAATTGATGGTGCATGATTTTGTGGAGGACCACAACCACGAGTTACTTTTGCCAGAAACAACTCATATGTTGTCGTCTCAACGAAAGGTTTCTGAAATTCATTGTCAACAAATTGAACTAGCTGATAGTGTCGGTGTACAACAAAAGAAATCGTTTGATTTATTGAGTAAAGAAGTAGGAGGCAGAACTAACTTGGGTTTTATACGTCTTGATCAAAAGAATTATCTTCGGAAAAAAAGAGAAAGAAGTTTGGTACAAGGGGAGGCCGGCTATTTATTGCAATACTTTCAAAGAAAGACGGTAGGAAATCCAACTTTCTACCATGCTTATCAGCTAGATATTGAAGATCAAATCACCAATGTGTTTTGGGCAGATGCTAGGATGCTGGTTGATTACAGTTATTTTGGTGATGTTGTTTCTCTTGATTCAACATATTGCACAAATAGTTCGCACAGACCACTAGCAATCATCTCGGGATTTAACCACCATCGAGGAGCCGTAATTTTTGGAGCTGCATTATTATATGACGAAACTGCTGAGTCATACGAGTGGCTCTTTGAGACATTTCTAGAAGCACATAAGCAGAAAATGCCTCAAACAGTTTTTACTGATCAAGCCAAATCAATGGCAAAAGCATTAGCCGAGGTTATGCCTGAAGCTTACCATGGTTTATGTACGTGGCACTTGATGCAAAATGGAATTAAACACTTAGGAAATTTAATGAAGGGGGAATCTTATTTTCTTAGTGACTTTAAGAAATGCATGTATGGTTATGAAGATGTAGAACAATTTGAAGATGGTTGGACATCCCTCCTTATAAAGTATGGTGTTCAGAAAAATGATTGGTTGCAAATAATGTACAATATAAAGGAGAAATGGGCATCTTGTTACATGAAGAAGACTTTGACATTAGGGATGCGAAGCACTCAACTTAGTGAAAGTGTGAATGCAGATATTAAAAATTTTATGAGTAAGAACTTGGATTTAATTAAATTTTTTGAGCGTTTTGAAGATGTTGTAGAAGAAAAGCGGTATAAAGAATTGAAGTGTGAATTTGAAGCACGCCAAAAAATTCCAAGACTGAAGAACTCATATTCTGATATTTTGCAACAAGTGTCCAAGCTTTATACTCCTACTATTTTCGACTTATTCCAACGTGAGTATGAGTTGTTTGAAGCATGCTTTGTGAAAAGCATGGACATACAAACATCATTATCTACTTATGTTATTGCCAAGAAAAGGAATATGGGAGAATGGCAAGTGACCTTCGATTTGGAAAAGAATACAATTTGTTGCTCTTGTCGTAAATTTGAAAGCTTTGGCATACTTTGTTGTCATTGCTTAAAAGTCTTCATTCATATGGACGTTACGTCAGTGCCTGAGCCTTATATTTTAAAGAGGTGGACAAAGATAGCAAGAAGTAGAGCTTCACAAACTATTGGTGTTAGTCATGTGGTAGAAGACTTGGATTTATCTCCAGCACAATGTTATAAGGAAATTTGTCCCCGCTTTATTAGGATAGTCACAGAAGGATGTAGAAGTCCTAGAGCTGTTGAGTTTCTTAAGGAAGTTGCTGATGAATTGGACGAGCAAATGCTAAAGTTTCAAAATATGCAAATAAGTAGTGAACAAGTGAATGGAACCTCTAACAATATTAAAGAGATATCAATTACTAATGATTGTGCAACACAAGTAAAGGGGTTTAAGAACAACGAAGGTCCAAAGGGTTCAAAACGTTGGAAAGAAGAACAAAGGTAA 2031 0.3663 MNEDWKPKVDMVFCSFEDAWEFWNTYGGKVGFGVRKDYTHRKKDGSVSSCRFVCCKEGMRKPDKRDYKTKNPRLETRTNCETRLGLKNVDGKLMVHDFVEDHNHELLLPETTHMLSSQRKVSEIHCQQIELADSVGVQQKKSFDLLSKEVGGRTNLGFIRLDQKNYLRKKRERSLVQGEAGYLLQYFQRKTVGNPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHRPLAIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKALAEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFKKCMYGYEDVEQFEDGWTSLLIKYGVQKNDWLQIMYNIKEKWASCYMKKTLTLGMRSTQLSESVNADIKNFMSKNLDLIKFFERFEDVVEEKRYKELKCEFEARQKIPRLKNSYSDILQQVSKLYTPTIFDLFQREYELFEACFVKSMDIQTSLSTYVIAKKRNMGEWQVTFDLEKNTICCSCRKFESFGILCCHCLKVFIHMDVTSVPEPYILKRWTKIARSRASQTIGVSHVVEDLDLSPAQCYKEICPRFIRIVTEGCRSPRAVEFLKEVADELDEQMLKFQNMQISSEQVNGTSNNIKEISITNDCATQVKGFKNNEGPKGSKRWKEEQR* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1411 676 SMART 26again6 521 548 IPR006564 GO:0008270
Mtr1g1411 676 PANTHER OS03G0181600 PROTEIN 2 632 - -
Mtr1g1411 676 Pfam MULE transposase domain 229 323 IPR018289 -
Mtr1g1411 676 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 632 IPR031052 GO:0006355
Mtr1g1411 676 Coils Coil 609 629 - -
Mtr1g1411 676 MobiDBLite consensus disorder prediction 657 676 - -
Mtr1g1411 676 Pfam SWIM zinc finger 511 544 IPR007527 GO:0008270
Mtr1g1411 676 Pfam FAR1 DNA-binding domain 21 107 IPR004330 -
Mtr1g1411 676 ProSiteProfiles Zinc finger SWIM-type profile. 510 546 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1411 Mtr-Chr1 17377616 17379800 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr1g1411 MULE 3.2e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1411 - - ccaj:109790316 892.493