Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1405 ATGGCAACAACAGAACCAATCGTTGAAGGCGCTACCGCGGCAGAGGAAGTGGCGGCGGTTCCGGTACCCGCTCCGGAGACAGGGCTAAAACACAAACTAGAGAGAAGATGGACTTTCTGGTACGATAACCAATCCAAACCTAAACAAGGTGCTGCTTGGGGATCCACTCTTCGTAAGGTTTACTCCTTTGACACCGTTGAAGAGTTTTGGTGCTTGCATGATCAGATATTCAAGCCCAGCAAGTTGCCTAGCAATGCTGACTTTCACTTGTTTAAGGATGGGATTGAACCAAAATGGGAAGATCCCGAGTGTGCCAATGGAGGAAAGTGGACTCTCACCAGCAAATCAAAGGGCAATCTTGATACCATGTGGCTCGAAACTTTGATGGCTTTGATTGGCGAGCAATTTGGAGACACTGAGGACATTTGCGGCGTAGTTGTGAGTGTGCGCCAGTGGCAAGACAAACTTTCATTGTGGACGAAAACAGCCGCAAATGAGTCGAACCAGATGAGCATTGGAAGGAAGTGGAAGGAAATCATTGATGTTAGCGACAAGATGACATATAACTTTCATGAAGATGCTAAAACCCGAGGTGCAAAGGCTCGATACACTGTATAA 618 0.4709 MATTEPIVEGATAAEEVAAVPVPAPETGLKHKLERRWTFWYDNQSKPKQGAAWGSTLRKVYSFDTVEEFWCLHDQIFKPSKLPSNADFHLFKDGIEPKWEDPECANGGKWTLTSKSKGNLDTMWLETLMALIGEQFGDTEDICGVVVSVRQWQDKLSLWTKTAANESNQMSIGRKWKEIIDVSDKMTYNFHEDAKTRGAKARYTV* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1405 205 Pfam Eukaryotic initiation factor 4E 33 189 IPR001040 GO:0003723|GO:0003743|GO:0006413
Mtr1g1405 205 PANTHER BNAA08G29940D PROTEIN 5 196 - -
Mtr1g1405 205 Gene3D RNA Cap, Translation Initiation Factor Eif4e 25 205 IPR023398 -
Mtr1g1405 205 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 5 196 IPR001040 GO:0003723|GO:0003743|GO:0006413
Mtr1g1405 205 SUPERFAMILY eIF4e-like 18 200 IPR023398 -
Mtr1g1405 205 ProSitePatterns Eukaryotic initiation factor 4E signature. 87 110 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1405 Mtr-Chr1 17329756 17333367 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1405 18 205 Eukaryotic Initiation Factors Gene Family AT5G35620 61.658 2.34e-81 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1405 K03259 - gmx:100499799 332.798