Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1403 ATGTTGCAAGATGTTATCCACCCTCCATCACATGATGATCAACTATCCATTGATGAAATTTCAAGTCCAATTAGTGCACAAATTTTTGAACTTTGTGACCCTAATTTGTTCCAAGACTCTCTACAACAAAATTCTGATGTAACTTCAAGCTCAAATTGTTGTCATGAAGAAAACAACAACAATTCTTCATATACCTTAAACAACATATCTCAAGCTTTAGATTTAGACAATAACATCAATAGCAATAACAATAGCAATAGCAATAGTACTGCAACAACTACTAGCACAACAAGCCCTACCACAAACAACGTTAACAACATCAACACAACAAATACCAATAATAATAACAACCTTTCCATTATCTTTGATTCACAAGAAGATCTTGACAATGACATTTCAGCTTCTATAGATTTCACATCATCACAATCTTTTCTCGTTCCGCCGCTTCTTCCATTAACAACTCATCAAGAACAACAATTTGATTTCTCTTCAACACAAACTCATCATCTTTCTGGTTTGAAAGGGCTACCACAATATCAAACTGATCCTATTTCTTCGGCAGCGCCGCTTATGAGTGCTTCATTCCCTTCTGTATTTGAAGATGATTGCATATCTTCAATTCCTTCTTATTCTCCTTCTTGTTCTTATCTTAGTAATGGCTTAGGTGTCTATATGCCTCATGGAAATCTTGCTACTGCTTTATCTGCTGATAGTTCTAGCTTATTTGGTGGAGGGATTCTATTAGGTTCTGAAATGCAGACACAAGATTTGGATTATCAAGGTGAAAATGGTGGAATTTATTGTACAGATTCTGTTCAACAGGTTTTTAACCCTCAAGATTTTCAGGCACTTGGTAATGAGAATCACAAACTAGTATCTGGTGCTGGAAGTTGTTCTGCCACTTTGGCACCAGAAATTTCACACTTGGAGGACTCTAGTTTGAAAGTTGGAAAACTTTCTGTTGAGCAAAGGAAAGAGAAGATTCATAGATATATGAAGAAGAGAAATGAAAGAAATTTCAGCAAGAAAATCAAGTATGCTTGTCGAAAAACTTTAGCGGATAGCCGGCCGCGAGTTAGAGGAAGGTTTGCAAAGAATGATGATTTTGGAGAGAATCATAGGCCAGGTAGGAGCAACCATGAAGATGATGATGAAATAGCTGTTAAAGAAGAAGATGATATGGTTGATTCCTCAGATATCTTTGCACATATCAGTGGACTTAACTCCTTCAAATGCAACTATTCCATCCACTCATTGATTTGA 1263 0.3626 MLQDVIHPPSHDDQLSIDEISSPISAQIFELCDPNLFQDSLQQNSDVTSSSNCCHEENNNNSSYTLNNISQALDLDNNINSNNNSNSNSTATTTSTTSPTTNNVNNINTTNTNNNNNLSIIFDSQEDLDNDISASIDFTSSQSFLVPPLLPLTTHQEQQFDFSSTQTHHLSGLKGLPQYQTDPISSAAPLMSASFPSVFEDDCISSIPSYSPSCSYLSNGLGVYMPHGNLATALSADSSSLFGGGILLGSEMQTQDLDYQGENGGIYCTDSVQQVFNPQDFQALGNENHKLVSGAGSCSATLAPEISHLEDSSLKVGKLSVEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAKNDDFGENHRPGRSNHEDDDEIAVKEEDDMVDSSDIFAHISGLNSFKCNYSIHSLI* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1403 420 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 17 420 - -
Mtr1g1403 420 ProSiteProfiles CCT domain profile. 324 366 IPR010402 GO:0005515
Mtr1g1403 420 MobiDBLite consensus disorder prediction 78 116 - -
Mtr1g1403 420 Pfam CCT motif 324 366 IPR010402 GO:0005515
Mtr1g1403 420 PANTHER CCT MOTIF FAMILY PROTEIN 17 420 - -
Mtr1g1403 420 MobiDBLite consensus disorder prediction 361 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1403 Mtr-Chr1 17305880 17310709 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1403 303 372 C2C2-CO-like Transcription Factor Family AT5G24930 38.571 3.19e-11 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mtr1g1403 CCT 5.6e-19 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1403 - - gmx:100793417 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g3336 7 50519696 50520247 Mtr1g1403 1 17305880 17310709 PCT