Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1387 ATGTTTGTCAATGCCTACAAGAACGTTCTTGCTTTTGCCGTTGCTACCGAATATTCTTTCCCTGAGGCAGACAAGGTTAAGGAGTACCTGAAGGACCCAAGTAAATTTGCTGTAGCTGTTGCTGCCCCAGCTGCTGCTGCATCTGGCGGTGCCCCTGCTGCCGCTGCCAAGGAGGAGGCTAAGAAGGAAGAGCCTGAAGAAGAGTCTGATGAAGACATTGGTTTCGGTCTATTTGGTGATGATTAG 246 0.4959 MFVNAYKNVLAFAVATEYSFPEADKVKEYLKDPSKFAVAVAAPAAAASGGAPAAAAKEEAKKEEPEEESDEDIGFGLFGDD* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1387 81 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0 1 78 - -
Mtr1g1387 81 MobiDBLite consensus disorder prediction 64 81 - -
Mtr1g1387 81 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN P0-LIKE 1 78 - -
Mtr1g1387 81 Pfam 60s Acidic ribosomal protein 1 78 - -
Mtr1g1387 81 MobiDBLite consensus disorder prediction 51 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1387 Mtr-Chr1 16937071 16937448 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1387 1 79 Cytoplasmic Ribosomal Protein Gene Family AT2G40010 67.089 1.64e-23 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1387 K02941 - mtr:MTR_1g044130 99.3673