Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1374 ATGTCATCGACTGGTTTTTCTGTTAGTCGAAGTCTCTTGGGATATTTCGAGGGGGTAATTACGTTGTTTTACAATCCACGTGGAATCCTAGCTGTTGAAACCATTTCAAACTTGGGAATTATGTACTATGTTTTCCTAAGTGGATTAGAGATGAATTCAGACACCATCTTAAGATCAAGAAAGAAAGGCACTAGCATGGCAATTGCTGGCATTGTGACATCAATGTTATTTGGTGTTGGATTTCTTACTCTGCAACAAAAACTTCTAGATAAAAAAGAAAAAACTCATATTAAAGCTTATCTATTTTGGTGTTTAACACTTTCTGTCACAGGCTTCCCCGTCCTTGCTAGAATTCTTGCTAAGCTTAAGCTTTTGTATACAAAGCTTGGAAAGGATACATTAACAGCAGCTATGTTAACTGATGCATATGGTTGGGTTTTGTTTACATTGTTGATTCCTGCTGCTAATAATTGGGGAGAAGGTTATTATCTCTCAGTAATCACTACCTTTTTGTTCATAGCTTTTTGTTTTACTGTGGTGAGACCTATCCTTACTCCAATCATTGAAAACCGAACAAATAAGAACATGTGGCGCAAGTCACATATGTTGGACGTATTTATAGGATTGTTTATTTGTTCGTATATTACGGATTTTCTTGGTACGCATCCTATTGTTGGAGCTTTTGTGTTCGGATTGATTTTGCCTCATGGAAAGTTTGCTGATATGGTTATGGAAATGTCAGATGACTTTGTTACTGGTATTCTGTGTCCTGTTTACTTTTCTGGATTTGGTTTTAAACTCGACTTGCCAGTACTTTGGAACACACCAAATTCAGTTTTAATGATGCTTATTATGGTTTTGTTATGCATACCAAAAGTTTTGAGCTCTTTGATTGTCACTTTCTTCTTCGGTATGCCTGCTCGAGATGGCCTTTCCATTGGTTTGCTTCTCAACACCAAGGGTGTCATGGCCGTCATACTACAAAATGTTGCTTGGGACAAACGGTTTTTGGATCCATGTTCTTTCATGGTTATGACGCTTGCTATTATATTGATGACAGTGATAGTCTCTCCCTTAATAAATGCCATATACAAACCAAAATTCCGATTCATGCAATCGCAATTAAGAACCGTGCAAAAGCTGAGGTTTGATATGGAGCTTCGAGTCGTCGCTTGTGTCCACAATGCTAAACATGCCACTAACATAATCCATGTCCTTGAAGCCACAAATGCTACCAGAATTTCACCGGTACATGTCTCTGCAGTTCACCTTCTTGAACTCACTAGACATGGCACTGCTATCCTTGTTTCCCAGATGGCTGATTTAAACAACATAGCAGGCGCAGAAACAACCAACTATGGCCCAAAAGCAGAGTTTGAGATCATAACTACTGCATTTAAAGAATTTGTAGAACAATACAATGCTGTTAGATTTGACACATCAAGTGTTGTCTCATCCTATACAACAATCCATGAGGACATCTACAACGTAGCCGAAGAGAAACGTGCGAGCCTAATTCTCCTTCCCTTTCACAAAGAGTACTCAACAGTAGGAGGTTCTCCAGAAATAAGCCACAATGAACATTGTGAGATAAACGAAAATGTTCTTCAACACGCACCTTGTTCTGTAGGGATCTTTGTGGACCGCGGACTAGGATCGTTGTTAAAAACAAAAATGCGCATTATAACCCTCTTCATTGGAGGACCTGATGACCGTGAAGCCTTGTCTATCGCATGGAGAATGGCAGGGCATTCAGGAACACAATTACATGTTGTGAGGATCCATTTGTTAGGTAAGGCTGCAGAAGAAAAGGTATTGAAAAAGAAAATAAGCAAGTCTCCTCATGGAATGTTGTCGACTGTTATGGACGGTGTGATGCAGAAAGAGTTGGATGAAGAGTATATATTTTCCTTCAGGCACAAGGCAGTGAATAATAATGATTCAATTGTTTACTTAGAAAAAGAAGTGCATTCGGATACCGGTGAAGAGATTCCAACACTTCTTAATGAGATTGATAAACCTGGATATGATTTGTACATTGTTGGACAAGGCAGTGGTAAGAACAAGACGATCTTTTCGAAGTTGTTGGAGTGGTGTGACCATCCTGAACTTGGTGTTATAGGTGACATATTAGCTTCAACTAGCTTTGGTACACACTCTTCTGTGCTTATTGTGCAGCAGTACATGGTTGGGAGAAAACGTGTTGTTTATAAATGTCATAATGAAATGAAAAATAGTCCTGAGGTATTGTAA 2253 0.3893 MSSTGFSVSRSLLGYFEGVITLFYNPRGILAVETISNLGIMYYVFLSGLEMNSDTILRSRKKGTSMAIAGIVTSMLFGVGFLTLQQKLLDKKEKTHIKAYLFWCLTLSVTGFPVLARILAKLKLLYTKLGKDTLTAAMLTDAYGWVLFTLLIPAANNWGEGYYLSVITTFLFIAFCFTVVRPILTPIIENRTNKNMWRKSHMLDVFIGLFICSYITDFLGTHPIVGAFVFGLILPHGKFADMVMEMSDDFVTGILCPVYFSGFGFKLDLPVLWNTPNSVLMMLIMVLLCIPKVLSSLIVTFFFGMPARDGLSIGLLLNTKGVMAVILQNVAWDKRFLDPCSFMVMTLAIILMTVIVSPLINAIYKPKFRFMQSQLRTVQKLRFDMELRVVACVHNAKHATNIIHVLEATNATRISPVHVSAVHLLELTRHGTAILVSQMADLNNIAGAETTNYGPKAEFEIITTAFKEFVEQYNAVRFDTSSVVSSYTTIHEDIYNVAEEKRASLILLPFHKEYSTVGGSPEISHNEHCEINENVLQHAPCSVGIFVDRGLGSLLKTKMRIITLFIGGPDDREALSIAWRMAGHSGTQLHVVRIHLLGKAAEEKVLKKKISKSPHGMLSTVMDGVMQKELDEEYIFSFRHKAVNNNDSIVYLEKEVHSDTGEEIPTLLNEIDKPGYDLYIVGQGSGKNKTIFSKLLEWCDHPELGVIGDILASTSFGTHSSVLIVQQYMVGRKRVVYKCHNEMKNSPEVL* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1374 750 PANTHER CATION/H + ANTIPORTER 5 736 - -
Mtr1g1374 750 PANTHER CATION/H(+) ANTIPORTER 21-RELATED 5 736 - -
Mtr1g1374 750 Pfam Sodium/hydrogen exchanger family 14 359 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr1g1374 750 Gene3D - 3 370 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1374 Mtr-Chr1 16692100 16695235 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1374 5 729 Antiporter Super Family AT2G13620 36.685 6.36e-156 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1374 - - gmx:100792990 899.812