Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1372 ATGTCAGGAGAGCTAGGAGTGCTAAATGCACTTGATGTGGCCAAGACACAATTGTATCACTTCACTACAATTGTGATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTTTTCTGCATTTCCCTTGTCACAAAGTTGTTAGGGAGAATATATTACACTGAACCAAATCCAACAAGACCAGGAACACTTCCACCAAGTGCTCAATCAGCTGTAACTGGTGTTGCACTTGTTGGAACACTAGCAGGCCAATTATTCTTTGGTTGGCTTGGCGACAAACTTGGTAGGAAAAAAGTCTATGGTTTAACACTTATTCTCATGGTGGTTTGTTCAGTTGCTTCAGGACTCTCTTTTGGATCAAGTCCAAAGAGTGTTATGGCAACACTTTGTTTCTTTAGGTTTTGGCTTGGTTTTGGTATTGGTGGTGATTACCCTCTTTCAGCTACAATCATGTCTGAATATGCTAACAAAAAAACTAGAGGTGCATTTATTGCTGCTGTTTTTGCCATGCAAGGTTTTGGTATCTTAGGTGGTGGAATTGTTGCTTTGACTGTGGCTTCTATATTTGATCACAAATATAAGGTTCCTACCTTTGAAGAAAATCCAGCTGCATCATTGTTAGTGCCTCAATTTGATTATGTTTGGAGACTTATTCTTATGTTCGGTGCTCTTCCAGCTGCATTGACGTACTACTGGCGAATGAAAATGCCAGAAACAGCTCGTTACACGGCTCTTGTTGCTAAGAACGCGAAACAAGCTGCTGCGGATATGTCTAAGGTGTTGCAAGTTGAACTTGAAGTTGAAGAGGAGAAGGTAGAAAAAATGACTAGTGATAAAAGGAATAGTTATGGCTTGTTCAGCAAGCAATTCGCAGCACGACATGGTTTGGCTTTGTTTGGAACATGTAGTACATGGTTTTTGTTGGATATTGCTTTCTATAGTCAGAATCTTTTCCAAAAGGACATTTTTAGCGCAATCGGATGGATCCCTCCGGCAAAAGAAATGAATGCAATTCATGAGGTTTACAAGATTGCAAGAGCACAAACACTTATTGCGTTGTGCAGTACTGTTCCGGGTTACTGGTTCACAGTAGCGTTTATCGATCACATGGGTCGTTTCGCTATTCAAATGATGGGATTCTTCTTCATGACTGTTTTCATGTTTGCACTTGCCATACCATATGATCATTGGAGCAAGGAAGAGAATAGAATTGGGTTTGTTGTAATATACTCACTCACATTCTTCTTTGCTAATTTTGGTCCAAATGCTACGACATTTGTTGTACCGGCAGAGATTTTTCCGGCTAGGTTAAGGTCTACCTGTCATGGAATCTCAGCTGCTGCAGGAAAGGCAGGAGCAATTGTTGGTGCATTTGGATTCTTGTATGCTGCACAAAGTAAAGATCCTACCAAGACCGATAAAGGGTACCCAACCGGTATTGGGATTAAGAACTCTCTTATCATGCTTGGTGTGATCAACTTTGTTGGGATGTTATGCACATTACTTGTTCCGGAATCAAAGGGAAAATCGTTGGAAGAGTTAAGTGGAGAGAATGAGGGAGAAGGTGCCGAGGCCACTGAGCAAGAAGGATCAAGGGTTTAA 1602 0.4114 MSGELGVLNALDVAKTQLYHFTTIVIAGMGFFTDAYDLFCISLVTKLLGRIYYTEPNPTRPGTLPPSAQSAVTGVALVGTLAGQLFFGWLGDKLGRKKVYGLTLILMVVCSVASGLSFGSSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILGGGIVALTVASIFDHKYKVPTFEENPAASLLVPQFDYVWRLILMFGALPAALTYYWRMKMPETARYTALVAKNAKQAAADMSKVLQVELEVEEEKVEKMTSDKRNSYGLFSKQFAARHGLALFGTCSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAKEMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDHMGRFAIQMMGFFFMTVFMFALAIPYDHWSKEENRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKTDKGYPTGIGIKNSLIMLGVINFVGMLCTLLVPESKGKSLEELSGENEGEGAEATEQEGSRV* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1372 533 SUPERFAMILY MFS general substrate transporter 11 515 IPR036259 -
Mtr1g1372 533 TIGRFAM 2A0109: phosphate:H+ symporter 10 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Mtr1g1372 533 Coils Coil 258 278 - -
Mtr1g1372 533 PANTHER HIGH AFFINITY INORGANIC PHOSPHATE TRANSPORTER 3 528 - -
Mtr1g1372 533 CDD MFS_PhT 24 507 - -
Mtr1g1372 533 Pfam Sugar (and other) transporter 25 514 IPR005828 GO:0016021|GO:0022857|GO:0055085
Mtr1g1372 533 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 508 IPR020846 GO:0022857
Mtr1g1372 533 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 3 528 - -
Mtr1g1372 533 Gene3D MFS general substrate transporter like domains 19 267 IPR036259 -
Mtr1g1372 533 Gene3D MFS general substrate transporter like domains 271 531 IPR036259 -
Mtr1g1372 533 MobiDBLite consensus disorder prediction 510 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1372 Mtr-Chr1 16627116 16631198 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1372 4 519 Inorganic Solute Cotransporters AT5G43360 81.008 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1372 K08176 - gmx:100780201 875.159