Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1353 ATGGAAAATACAAGGCGCTGGTTTAGTAAGTTGAGGTTTAAAAGAAAGGAAGCTACAAGCACGTCAAATGCGGTGAACGTAATTGATGAAAAACTGCCTTCAAGTGAAACCAAACAGAAGGTTGAAGCTGCTAAGCATTACGTAGAAAGTTATTATAAGAACCAGAAGCAGAGCCAGCAGGAGAGGAAAGAAAGACGTAATATGCTAGAAAAGAAATTGGCTGATGCCGAAGCATCCGAGGAAGAGCAGAACAATTTACTTAAGCATTTGGAGAAAACAGAGACAGAAATCATGCGCCGGCAGAGACTTAAGATGGGGTCTGATGACTTTGAGCCCTTGACTATGATTGGGAAGGGTGCATTTGGAGAGGTTAGAATCTGCCGGGAGAAGGCAACTGGTCAGGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGTAGAGGACAGGTTGAACATGTCAAAGCTGAGAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCATAATGGAGTATCTACCCGGTGGAGATATGATGACGTTGCTGATGCGGAAAGATATACTGACTGAAGATGTAGCTAGGTTCTATATCGGGGAGTCTGTGCTAGCCATAGAGTCTATTCATAAACATAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGCTGGATAGAAATGGTCACATGAAATTATCAGATTTTGGATTATGTAAACCGCTAGACTGCAGTAACCTTCAGGAAAAAGACTTATCTGTTGGAGTTAACAGAAGTGGAGTCCTTCAAAGTGACGGACGCCCTTTACCTCCTAAACGATCACAACAGCAGCAACTGGAGCATTGGCAGAAAAATCGCAGCAGAATGCTGGCGTATTCTACGGTTGGAACACCTGATTATATTGCTCCAGAAGTTCTTCTGAAGAGAGGATATGGCATGGAATGTGATTGGTGGTCTCTAGGAGCCATAATGTATGAAATGCTTGTGGGGTATCCGCCATTTTATTCAGACGAACCAATGGCAACATGTAGAAAGATTGTAAATTGGAAAACTTATTTAAAATTTCCGGAAGAATCTAAACTATCACCAGAGGCAAAGGATCTTATTTGTAGTCTCCTATGTAATGTTGAACATAGGCTTGGAACTAAAGGAGCTGATGAAATAAAGGCTCACCCATGGTTCAAAGGTGTTGAATGGGACAAATTGTACCAAATGAAAGCTGCTTTTATTCCTGAGGTCAATGATGAATTAGATACTCAAAATTTCGAGAAATTTGATGAGGTGGACATGCAAACTGAACCTTCCTCACAGGCAGGGCCGTGGAGAAAGATGCTTCCATCTAAAGATATTAACTTCGTTGGTTACACATACAAGAATTATGAAGTGGTGGATGCCAGTGTAATACCTGGATTTGCTGAATTGAAGAAGAAGTCAAAACCTAAAAGGCCTTCAATTAAGTCCTTATTTGAGGATGAATCAGCTAAGGCTTCTTCTCATCATCAACCTGTAAGAGGGAGCTTCTTAAGTCTCTTGCCTCCACAAATGGAAACTCCAGAGAAAAATGAATCACAATGA 1623 0.4048 MENTRRWFSKLRFKRKEATSTSNAVNVIDEKLPSSETKQKVEAAKHYVESYYKNQKQSQQERKERRNMLEKKLADAEASEEEQNNLLKHLEKTETEIMRRQRLKMGSDDFEPLTMIGKGAFGEVRICREKATGQVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDILTEDVARFYIGESVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDLSVGVNRSGVLQSDGRPLPPKRSQQQQLEHWQKNRSRMLAYSTVGTPDYIAPEVLLKRGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMATCRKIVNWKTYLKFPEESKLSPEAKDLICSLLCNVEHRLGTKGADEIKAHPWFKGVEWDKLYQMKAAFIPEVNDELDTQNFEKFDEVDMQTEPSSQAGPWRKMLPSKDINFVGYTYKNYEVVDASVIPGFAELKKKSKPKRPSIKSLFEDESAKASSHHQPVRGSFLSLLPPQMETPEKNESQ* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1353 540 Pfam Protein kinase C terminal domain 429 473 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mtr1g1353 540 MobiDBLite consensus disorder prediction 52 83 - -
Mtr1g1353 540 PANTHER SERINE/THREONINE-PROTEIN KINASE 31 538 - -
Mtr1g1353 540 ProSiteProfiles AGC-kinase C-terminal domain profile. 411 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr1g1353 540 SMART serkin_6 110 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1353 540 Gene3D Phosphorylase Kinase; domain 1 80 193 - -
Mtr1g1353 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 229 241 IPR008271 GO:0004672|GO:0006468
Mtr1g1353 540 SUPERFAMILY Protein kinase-like (PK-like) 86 461 IPR011009 -
Mtr1g1353 540 Coils Coil 59 96 - -
Mtr1g1353 540 MobiDBLite consensus disorder prediction 493 540 - -
Mtr1g1353 540 Gene3D Transferase(Phosphotransferase) domain 1 194 272 - -
Mtr1g1353 540 Gene3D Transferase(Phosphotransferase) domain 1 307 430 - -
Mtr1g1353 540 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Mtr1g1353 540 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 31 538 - -
Mtr1g1353 540 CDD STKc_NDR_like 108 474 - -
Mtr1g1353 540 MobiDBLite consensus disorder prediction 56 83 - -
Mtr1g1353 540 MobiDBLite consensus disorder prediction 493 514 - -
Mtr1g1353 540 SMART pkinase_C_6 411 475 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr1g1353 540 Pfam Protein kinase domain 112 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1353 540 ProSiteProfiles Protein kinase domain profile. 110 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1353 Mtr-Chr1 16333637 16339820 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1353 16 538 AGC Kinase Gene Family AT3G23310 78.897 0.0 859
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mtr1g1353 Pkinase 6.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1353 K08790 - gmx:100795087 913.294