Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1349 ATGGATTCCAAAATATTTGCCTTACTATCCTTTTTCCTCTTCATGCTTGTAGCACTGAAAATAAGGAAGAATCTCAAGAAAAAAGGCTCATCTCCAAACCTACCCCCAGGACCATGGAAGCTACCTATTATAGGACACATACATCATCTAGTTACCTCTACACCACATCAAAAATTAAGAGACTTGGCCAAAATACATGGACCCTTAATGCAACTACAACTAGGAGAGATCTTTGCCATTGTTGTTTCCTCACCAGACTATGCTAAGGAGGTACTTAAAACCCATGATGTAATATTTGCATCTAGGCCTAAAATTTTGGCCATTGAAATACTATCATATGGATTCACAAATATTGGTTTTTCACCTTATGGAAATTATTGGAGACATTTACGAAAAATATGCACAATGGAGCTTTTATCGCAAAAACATGTGAGTTCATTCCATCCAATAAGAGAAGAAGTGTTTACCAATCTCATCAAAAGGATTGGTTCGAAGCAAGGGTCATCCATCAACCTCACTGAACTTGTAGTTTCATCGACATTTGCTATCCTTTCAAGGGCTGCATTTGGAAACAAATGCAAAGACCAAGAAGAGTTCGCGTCTTTGGGGAAGGGAGAATCAATTGCTGGAGGTTTTGACATAGGTGAACTGTTTCCTTCATCTAAATGGATTCAACTTGTTTCCGGTTTGAGGCCTAAACTTGAGAGGTTGCATAGACGTATTGATCGAATACTAGAAAACATCATCATTGAACATAAAGAAGCAAATTCAAAAGCAAAAGAATGCCAAGAAGAAGCAGAAGAAGATTTGGTTGACGTTCTTCTAAAATACCAACGTCGCAATGATAATGAAAAAGATATATGCTTAACTGACAACAACATCAAGGCTGTACTCCTAGACATGTTTGGTGCTGGAGGAGATACATCGAGTACCACCATAGTTTGGGCAATGGCAGAGTTGGTAAGGGATGAAAGAGTGATGAAGAAAGCACAAGATGAAGTAAGAGAAATGTTCAACACAAAAGGAATTGTTGGTGAGAACTATATTAATGAGCTCACTTATTTGAAGTCAGTTGTGAAAGAGACCTTAAGGTTACACCCTCCAGCTCCTCTTTTACTTCCAAGAGAATGTGAACAAGCATGTGAGATTGATGGTTATCATATACCAACCAAAAGCAAGGTGATAGTCAATGCATGGGCGATTGGAAGAGATCCAAAGTATTGGACTGAACCAGAGAGGTTTTATCCAGAGAGATTCATTGGTAGCTCTATTGACTATAAAGGGAATAATTTTGAGTACATTCCTTTTGGTTCTGGAAGAAGAATATGCCCGGGCATAACATTTGGTTTGGTAAATGTTGAGTTGGCACTTGCATTGTTGTTGTATCACTTTGATTGGAGGCTTCCCGATGGAACGAAAGGTGAGGACTTAGACATGACCGAGCAATTTGGAGCGACCGTCAAAAGAAAAGATGACTTGTACTTGATACCTACTGCTCCTCTTCCTATATGGTAA 1515 0.3888 MDSKIFALLSFFLFMLVALKIRKNLKKKGSSPNLPPGPWKLPIIGHIHHLVTSTPHQKLRDLAKIHGPLMQLQLGEIFAIVVSSPDYAKEVLKTHDVIFASRPKILAIEILSYGFTNIGFSPYGNYWRHLRKICTMELLSQKHVSSFHPIREEVFTNLIKRIGSKQGSSINLTELVVSSTFAILSRAAFGNKCKDQEEFASLGKGESIAGGFDIGELFPSSKWIQLVSGLRPKLERLHRRIDRILENIIIEHKEANSKAKECQEEAEEDLVDVLLKYQRRNDNEKDICLTDNNIKAVLLDMFGAGGDTSSTTIVWAMAELVRDERVMKKAQDEVREMFNTKGIVGENYINELTYLKSVVKETLRLHPPAPLLLPRECEQACEIDGYHIPTKSKVIVNAWAIGRDPKYWTEPERFYPERFIGSSIDYKGNNFEYIPFGSGRRICPGITFGLVNVELALALLLYHFDWRLPDGTKGEDLDMTEQFGATVKRKDDLYLIPTAPLPIW* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1349 504 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PANTHER CYTOCHROME P450 71B11-RELATED 6 498 - -
Mtr1g1349 504 Pfam Cytochrome P450 35 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 498 - -
Mtr1g1349 504 Coils Coil 245 265 - -
Mtr1g1349 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Mtr1g1349 504 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PRINTS E-class P450 group I signature 293 310 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PRINTS E-class P450 group I signature 313 339 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PRINTS E-class P450 group I signature 356 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr1g1349 504 Gene3D Cytochrome P450 19 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1349 Mtr-Chr1 16298635 16300544 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1349 9 498 Cytochrome P450 AT3G26300 42.169 3.05e-132 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1349 - - gmx:100801936 730.709