Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1348 ATGGAAACTGCAAGGCGCTGGTTTAGAAAGCGTTGGTTAAAAAAGAAGGAAGCTACAAGCACGTCAAATGATCATCAGTGTTTGGCGCTGGACTTAGTAAATGAGGAACCACCTTCAAATGAAACTAAACTGAAGGTTGAAGCTGCGAAGCATTTCGTAGAAAGTTATTATAAGAACCAGAAGCAGAACCAGCAGGAGAGGAAAGAAAGACGTAATATCCTAGAAAACAAATTGGCCGATGCTGAAGTATCCAAGGAAGACAAGAAAAACTTGCTTAAGAATTTTGAGGAAATGGAGACAGAAATCATGCGCCGTCAGAGACTTAAGATGGGTGCTGATGACTTTGAGCCACTGACTATGATTGGGAAGGGTGCATTTGGAGAGGTTAGAATCTGTCGGGAGAAGACAACTGGTCAGGTATATGCCATGAAGAAGCTTCAGAAATCAGAGATGCTTCGAAGAGGACAGGTTGAATATGTCAAATCTGAAAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCATAATGGAGTATCTACCCGGTGGAGATATGATGACGTTGCTGATGCGGAGAGAAGTACTGACTGAAAATGAAGCTAAGTTCTATATCGGGGAGACTGTGCTAGCCATAGAGTCTATTCATAAACATAATTATATTCATAGAGATATCAAGCCCGACAACTTGCTTCTGGATAGAAATGGTCACGTGAAATTATCAGATTTTGGATTATGTAAGCCGCTAGACTGCAGTAACCTTCAGGAAAAAGACTTATCTGATGGAGTTAACAGAAGTGGTGTCCTTCAAAGTGATGAACTTACTTTATCTCCCAACCAATCACAACAGCAGCAACTGGAGCATTGGCGGAAAAATCACAGCAGAATGCTGGCCTATTCTACGGTTGGAACACCTGATTATATTGCTCCAGAAGTTATTCTGAAGAGAGGATATGGCGTGGAATGTGACTGGTGGTCTCTTGGAGCCATAATGTATGAAATGCTTGTAGGGTATCCACCATTTCATTCAGACGATCCAAGGACAACGTGTAGAAAGATAGCACATTGGAAAACTTACTTAAAATTTCCAAAAGATAAACTATCACCAGAGGCAAAGGATCTTATTTGTCGTCTCCTATGTAATGTGAAGCAGAGGCTAGGAGCTAAAGGAGCTGATGAAATAAAGGCTCACCCATGGTTCAAAGTAGTTGAATGGGAGAAATTGTACCAAATGAGAGCTCCTTTTATTCCTAAGGTCAATGATGAATTGGATACTCGAAATTTCGATAAATTTGAAGAGGAGGACCAGAAAACTGAACCTTCGCCTAAGGCAGGTCCGTGGAGAAAGATGCTTCAATCTAAAGATATTAACTTTGTTGGTTACACATACAAGAATTATGAAATGGTGGATGCAAATGCAATACCTGGATTTGTTGAACTGAAGCAGAAGCCAAAACCTCAAAGGCCATCTATCAACTCGTTATTTGAGGATGAATCAGCCGAGGCTTCTTCTCATCAACCGGCTAGAGAGAGAGAAATATGA 1584 0.4053 METARRWFRKRWLKKKEATSTSNDHQCLALDLVNEEPPSNETKLKVEAAKHFVESYYKNQKQNQQERKERRNILENKLADAEVSKEDKKNLLKNFEEMETEIMRRQRLKMGADDFEPLTMIGKGAFGEVRICREKTTGQVYAMKKLQKSEMLRRGQVEYVKSERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRREVLTENEAKFYIGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHVKLSDFGLCKPLDCSNLQEKDLSDGVNRSGVLQSDELTLSPNQSQQQQLEHWRKNHSRMLAYSTVGTPDYIAPEVILKRGYGVECDWWSLGAIMYEMLVGYPPFHSDDPRTTCRKIAHWKTYLKFPKDKLSPEAKDLICRLLCNVKQRLGAKGADEIKAHPWFKVVEWEKLYQMRAPFIPKVNDELDTRNFDKFEEEDQKTEPSPKAGPWRKMLQSKDINFVGYTYKNYEMVDANAIPGFVELKQKPKPQRPSINSLFEDESAEASSHQPAREREI* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1348 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Mtr1g1348 527 MobiDBLite consensus disorder prediction 442 456 - -
Mtr1g1348 527 MobiDBLite consensus disorder prediction 442 461 - -
Mtr1g1348 527 Coils Coil 57 108 - -
Mtr1g1348 527 MobiDBLite consensus disorder prediction 500 514 - -
Mtr1g1348 527 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 39 516 - -
Mtr1g1348 527 CDD STKc_NDR_like 113 478 - -
Mtr1g1348 527 Gene3D Transferase(Phosphotransferase) domain 1 312 432 - -
Mtr1g1348 527 ProSiteProfiles AGC-kinase C-terminal domain profile. 415 487 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr1g1348 527 Gene3D Phosphorylase Kinase; domain 1 84 198 - -
Mtr1g1348 527 Pfam Protein kinase C terminal domain 433 477 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mtr1g1348 527 SMART serkin_6 115 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1348 527 Pfam Protein kinase domain 117 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1348 527 MobiDBLite consensus disorder prediction 495 527 - -
Mtr1g1348 527 Gene3D Transferase(Phosphotransferase) domain 1 199 269 - -
Mtr1g1348 527 Gene3D Phosphorylase Kinase; domain 1 433 448 - -
Mtr1g1348 527 SMART pkinase_C_6 415 479 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mtr1g1348 527 ProSiteProfiles Protein kinase domain profile. 115 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1348 527 SUPERFAMILY Protein kinase-like (PK-like) 113 468 IPR011009 -
Mtr1g1348 527 PANTHER SERINE/THREONINE-PROTEIN KINASE 39 516 - -
Mtr1g1348 527 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1348 Mtr-Chr1 16281569 16287131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1348 34 520 AGC Kinase Gene Family AT3G23310 75.610 0.0 778
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mtr1g1348 Pkinase 1.2e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1348 K08790 - gmx:100795087 790.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr7g2915 7 45930992 45937469 Mtr1g1348 1 16281569 16287131 PCT