Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1334 ATGGGTGCTCCTAAGCAAAAATGGACCGGAGAAGAAGAGGCAGCTCTAAAAGCCGGAGTACTCAAACACGGAGCTGGAAAATGGCGCATCATACTTAAAGACCCAGAATTCAACATCATTTTGTGTAATCGCTCAAATGTAGACCTCAAGGACAAATGGAGGAACTTAACTATGACGACAACATCGAGATCAAGGAAGAAGACAGAAAACATTTTGTTTCTACCTCCACCTAAAGTTGAAAATAATAACCAAGATTCGAGTGGAATATCAAGACTGGATCATGGGATTGCGTCAACTTCAACAAAAATACGCGAGGAAACAAGAAATGATTCTCCAAAAGCAACCGAGAGAAATGATGATGTCAACTTCCTTTCAAAATACGAAGAAATCAATGAAGAGATTTTTAAAATGATGAAGGGTCTCACACCTGAACAGGCGGTAGAAGTAACTGCAAAAGCAATGGAGGAGGCAGAAGCTGCCCTGACTAAGGCTGATGAAGCAACTAAGGAGGCAGAGGTTGCTGAAGATGAAGCAGAGGCTGCACGATTGTTTGCAAAAGCAGAAATGAAGAAAGCACTAAAAATGCTCAAGATTTAA 597 0.4104 MGAPKQKWTGEEEAALKAGVLKHGAGKWRIILKDPEFNIILCNRSNVDLKDKWRNLTMTTTSRSRKKTENILFLPPPKVENNNQDSSGISRLDHGIASTSTKIREETRNDSPKATERNDDVNFLSKYEEINEEIFKMMKGLTPEQAVEVTAKAMEEAEAALTKADEATKEAEVAEDEAEAARLFAKAEMKKALKMLKI* 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1334 198 Coils Coil 150 184 - -
Mtr1g1334 198 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Mtr1g1334 198 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Mtr1g1334 198 PANTHER TELOMERE REPEAT-BINDING FACTOR 2 1 87 - -
Mtr1g1334 198 PANTHER TELOMERE REPEAT-BINDING FACTOR 2 99 195 - -
Mtr1g1334 198 PANTHER SINGLE MYB HISTONE 4 99 195 IPR044597 GO:0003691
Mtr1g1334 198 PANTHER SINGLE MYB HISTONE 4 1 87 IPR044597 GO:0003691
Mtr1g1334 198 SUPERFAMILY Homeodomain-like 2 66 IPR009057 -
Mtr1g1334 198 CDD SANT_TRF 6 57 - -
Mtr1g1334 198 SMART sant 4 59 IPR001005 -
Mtr1g1334 198 Gene3D - 8 84 - -
Mtr1g1334 198 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1334 Mtr-Chr1 16049853 16050807 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1334 1 87 Single Myb Histone (SMH) Gene Family AT5G67580 62.069 9.97e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mtr1g1334 Myb_DNA-binding 2.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1334 K09422 - gmx:100779583 118.242