Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1326 ATGGGAATAAGAGATTTTCACTTCAAAGTCAAGGCACTTAGGGTGAAACTCTCATGTTTAGGAAATAGAAAGGTAAGAAGAAATAATGGAGTTGGAAGCAAGCAATCATGGATGATGCCAATATCACATGGTCATCATGTAGTGGAGCATGATTGGATTAATGGTGATTCTGATGACTGTGAGTTTGATTCAGTTGTGATACAAAGAGAGCAAATTGGTGAGACAGAATTGTGGTATTGTGGAATCTTTGATACTTTGGTTGGAGATTGTGTTACCAAATATTTGCAAGCCAATTATTTTGACAAGAATCTCAAAGAGTCTCATTTGAGGAGAAAAGCCAAAGAAACACTCAAGAGAGCATACCTAGGTGCAAAAACAAAGATCAGAGAGATGCACAAATCAGATGAAACATGCATCATAGGTTCAACATCTGTGATGATAATAAATGGAGAAAAACTCGTGCTAGCCAACATCGGAGATTACAGAACTGTTTTGTGTAGAGATGGTGTAGCTTATCAGACAATTGGAAAGCACAATCAATCATCTAAGAAACATTGGTTTCACAGACTTTTTTCAGGTACAAAGGCTTCTAAAGCTTCAGAACTTGTGGTTGGAAGTTATTGGATTGACTCTAGTACTGAATTTGTTATCTTGGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAAGCAGTGAATCTTATCAGGCACATAGAGGATCCACAAGAAGCAGCAGAGTGTTTGGCTAAGGAAGCATTGGTTAGGATGAGCAGAAGCCATATTTCATGTTTAATCATTCGATTTGATTGA 813 0.3788 MGIRDFHFKVKALRVKLSCLGNRKVRRNNGVGSKQSWMMPISHGHHVVEHDWINGDSDDCEFDSVVIQREQIGETELWYCGIFDTLVGDCVTKYLQANYFDKNLKESHLRRKAKETLKRAYLGAKTKIREMHKSDETCIIGSTSVMIINGEKLVLANIGDYRTVLCRDGVAYQTIGKHNQSSKKHWFHRLFSGTKASKASELVVGSYWIDSSTEFVILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALVRMSRSHISCLIIRFD* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1326 270 Gene3D - 52 270 IPR036457 -
Mtr1g1326 270 PANTHER ALPHABET, ISOFORM E-RELATED 6 269 - -
Mtr1g1326 270 ProSiteProfiles PPM-type phosphatase domain profile. 59 269 IPR001932 -
Mtr1g1326 270 SUPERFAMILY PP2C-like 66 270 IPR036457 -
Mtr1g1326 270 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 44-RELATED 6 269 - -
Mtr1g1326 270 Pfam Protein phosphatase 2C 209 260 IPR001932 -
Mtr1g1326 270 Pfam Protein phosphatase 2C 79 180 IPR001932 -
Mtr1g1326 270 CDD PP2Cc 63 269 IPR001932 -
Mtr1g1326 270 SMART PP2C_4 46 267 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1326 Mtr-Chr1 15914964 15917988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1326 1 269 PP2C-type Phosphatase Gene Family AT3G23360 43.011 1.09e-68 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1326 K19704 - gmx:100794054 393.66