Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1298 TGTAGGTTCGAGGGAATCTCTTGGAACTCAGATGAAACTCGTATAGCATATGTTGCTGAAGAGCCTTCCCCTGCAAAGCCTACATTCAATGACTAGGGCTACAAGGTAAGTGGTTCTGATGACAAGGATTCCAGCAGCTGGAAAGGTCAAGGAGATTGGGAGGAAGACTGGGGAGAAACATATGCGGGAAAAAGACAGCCTGCACTTTTTGTCATAAACATTACTAGTGGAGAGGTTCAAGCCGTCAAAGGCATTGACAGATTTTTGAGTGTTGGCCAAGTTGTGTGGGCTCCATCAAGTGAAGGCTCTGCACAATATTTGGTTTTTGTTGGATGGTCATATGAGACAAGAAAACTTGGTATTAAGTACTGCTATAACAGGGCTTGTGCAGTATATGCTGTTAAAGCACCACACGAATCAAAACCTAATGAAAATGAGATCCACTCAACTGAAGATGCTCATGCACTAATCCTAACTCAAACCATAAGTAGTGCTTTTCTCCCACGGTTCAGCCCAGATGGAAATTTTCTTGTATTTTTATCAGCAAGAAGCTCAGTTGATACTGGAGCCCATTCTGCTACAAATTCACTTCATAGAATTGATTGGCCGAAGGATGTGAAACTCTATCAATCTGCAAAAGTTCATGATGTGATACCAGTTGTGCTGTGTGCGGACGATGATGGCTTTCCTGGGCTTTACTTTTCAAGTATCCTTAGTGATCCATGGCTTTCTGATGGCCACACATTGATTATACCCTCTGTCTGGCACAGCAGTCAAGTTTTACTTTCTGTAAATGTGTTGAGTGGACAAATAAAACGAATCACCCCTGCGGACTCAAATTTCTCGTGGAGTCTCCTTACGTTGCATGGGAACAATATTTTTGCTGTTTCTAGCAGTCCAGTAGATGTTCCTCAAGTCAAGTATGGAACCTTTGTTGAGAAGGAAGGTGGTAATAGTGAATGGAGGTGGTCAGATGTATCAAATCCCATATATAAATGCTCTGACAAGGTAAGATCTTTGTTGTCCTCTCTTACGTTTAGTATAATGAAGATCTCAGTCAAGGATGCTTCTGAAAATCCAACTAAAGGTTCTTGTAAACCTTTTGAATCTATATTTGTGTCATCAAAAACCAAGAAAAGCGACGCATGTGATCCACTAATTGTGGTCCTTCATGGGGGACCACACGCAGTCTCATTGTCAAGCTTTTCAAAGTCACATGCTTTTCTTTCTTCACTTGGATATAGCTTGTTGATTGTCAACTACAGAGGTTCATTAGGATTTGGAGAGGAAGCCTTACAATCTCTTCCGGGGAAGATTGGATCTCAGGACGTCAATGATGTACTCAGTGCTATTGATCATGTCATAGACTTGGGACTTGCCAGTCCATCAAAGATTGCAGTGCTTGGTGGTTCACATGGTGGCTTTCTGACAACCCACTTGATTGGCCAGGCTCCAGAGAAGTTTGTTGCAGCAGCTGCTAGGAATCCTGTTTGTAACCTTGCGCTGATGGTTGGTACAACTGATATTCCTGATTGGTGCTTTTTGGAGAGCTATGGTACCAAGGGAAGGGATAGGATAACTGAAGCACCTTCAGCAGAGGATCTGACTCTATTTTATAGCAAGTCTCCCATCGCACACCTCTCGAAGGTAAAAACAACAACAGTGTTTCTCTTAGGTGCCCAAGATCTTCGTGTACCAATTTCGACTGGACTACAATATGCTCGGGCTTTAAAGGAAAAAGGAGTGCCGGTTAAAGTCATCCTGTTTCCAAATGATGTTCATGGAATTGAAAGACCACAATCCGACTTTGAAAGCTTCCTTAGCATTGCTGCATGGTTCAACAAGTATTGCAAATGA 1857 0.4249 CRFEGISWNSDETRIAYVAEEPSPAKPTFND*GYKVSGSDDKDSSSWKGQGDWEEDWGETYAGKRQPALFVINITSGEVQAVKGIDRFLSVGQVVWAPSSEGSAQYLVFVGWSYETRKLGIKYCYNRACAVYAVKAPHESKPNENEIHSTEDAHALILTQTISSAFLPRFSPDGNFLVFLSARSSVDTGAHSATNSLHRIDWPKDVKLYQSAKVHDVIPVVLCADDDGFPGLYFSSILSDPWLSDGHTLIIPSVWHSSQVLLSVNVLSGQIKRITPADSNFSWSLLTLHGNNIFAVSSSPVDVPQVKYGTFVEKEGGNSEWRWSDVSNPIYKCSDKVRSLLSSLTFSIMKISVKDASENPTKGSCKPFESIFVSSKTKKSDACDPLIVVLHGGPHAVSLSSFSKSHAFLSSLGYSLLIVNYRGSLGFGEEALQSLPGKIGSQDVNDVLSAIDHVIDLGLASPSKIAVLGGSHGGFLTTHLIGQAPEKFVAAAARNPVCNLALMVGTTDIPDWCFLESYGTKGRDRITEAPSAEDLTLFYSKSPIAHLSKVKTTTVFLLGAQDLRVPISTGLQYARALKEKGVPVKVILFPNDVHGIERPQSDFESFLSIAAWFNKYCK* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1298 617 SUPERFAMILY DPP6 N-terminal domain-like 5 303 - -
Mtr1g1298 617 SUPERFAMILY alpha/beta-Hydrolases 380 616 IPR029058 -
Mtr1g1298 617 Pfam Acylamino-acid-releasing enzyme, N-terminal domain 3 138 IPR045550 -
Mtr1g1298 617 ProSitePatterns Prolyl endopeptidase family serine active site. 445 475 IPR002471 GO:0004252|GO:0006508
Mtr1g1298 617 PANTHER ENZYME-LIKE PROTEIN, PUTATIVE-RELATED 3 617 - -
Mtr1g1298 617 PANTHER SERINE PEPTIDASE S9 FAMILY MEMBER 3 617 - -
Mtr1g1298 617 Pfam Prolyl oligopeptidase family 400 616 IPR001375 GO:0006508|GO:0008236
Mtr1g1298 617 MobiDBLite consensus disorder prediction 19 52 - -
Mtr1g1298 617 MobiDBLite consensus disorder prediction 35 52 - -
Mtr1g1298 617 Gene3D alpha/beta hydrolase 369 615 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1298 Mtr-Chr1 15477376 15485956 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1298 384 600 Carbohydrate Esterase AT5G36210 27.650 8.65e-19 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1298 K01303 - mtr:MTR_1g040725 1174.07