Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mtr1g1292 | ATGTCGTGTCTTCTTTTGTTCTTTTATGTGTTTGTAATGATCAAATCACCTCATGCTGCAACAAAAATCAAAGGCCGTGAGGCAGAGTCTCTGTTGAAGTGGAAAGAAAGCTTTGACAACCAAAGCAAAGCATTACTCTCTTCATGGATTGGTAATAATCCTTGTAGTAGCTGGGAAGGAATCACATGTGATGATGATTCAAAATCCATCAACAAGGTAAATCTCACCAATATTGGACTAAAAGGTACACTTCAAAGTCTCAATTTCTCATCACTTCCAAAAATCCGTACCTTAGTTTTAAGAAACAACTTCCTGTACGGCATTGTTCCACACCATATTGGAGAGATGTCTAGTCTAAAAACTCTTGATTTGTCGATTAACAATCTTTTTGGATCAATACCACTATCCATAGGTAATTTGATTAATTTGGATACTATTAACCTTTCAGAAAATAATATCTCTGGACCACTTCCTTTCACTATAGGAAATTTGACAAAACTCAATATACTATATCTTTACTCAAATGATCTCACCGGACAAATTCCACCTTTCATAGATAATTTAATTAATTTGCATACTCTTTACCTTTCATACAATAATCTCTCTGAACCAATTCCTTTCACTATTGGAAACATGACAAAACTCATTAGATTATCTCTTTTCTCAAATTCTTTCACTAAGAATATTCCAACAGAAATTAATAGGCTTACCGATTTGAAAGCACTCGATTTGTATGATAATAATTTTGTTGGTCATTTACCTCATAATATTTGTGTCGGTGGGAAGTTGGAAAAATTCTCTGCTGCTCTTAACCAGTTCACAGGCCTAGTTCCAGAGAGTTTGAAGAATTGCTCAAGCCTTAAGAGACTGAGGCTTGAACAAAACCAACTGACTGGAAATATAACAAATAGTTTTGGTGTGTATCCAAACTTGGACTACATGGAATTGAGTGATAATAATTTGTATGGTCAAATTTCTCCAAATTGGGGAAAGTGCAAGAATCTCACAAGCCTTAAAATCTCCAACAATAATTTGACAGGAAGCATACCACCAGAACTAGGCAGAGCAACAAATTTACATGAACTTAACTTGTCTTCAAACCATCTTACGGGGAAAATTCCAAAGGAGCTAGAAAACTTATCTTTGTTGATCAAACTCTCGTTAAGTAACAATCATCTTTCTGGAGAAGTTCCTGAACAAATTGAATCATTGCACGAATTAACTGCATTGGAGCTTGCAGCAAATAATTTCAGTGGCTTCATCCCTGAAAAACTTGGTATGTTGTCTAGGTTATTGAAGTTAAATTTGAGCCAAAATAAGTTTGAGGGGAACATTCCTGTTGAGTTTGGCCAATTGAATGTTATTGAAAATCTTGATCTTAGTGGGAATTCTATGAATGGAACCATACCAGCAATGCTTGGCCAGTTAAATCACTTAGAAACATTGAATCTCTCACATAACAATCTCTCTGGTACCATTCCCTCAAGCTTTGTTGATATGTTAAGCTTGACAACTGTTGATGTATCTTACAACCAGTTGGAGGGTCCGACTCCAAACATTACAGCTTTCGGAAGAGCTCCAATTGAAGCATTGACAAATAACAAGGGCTTGTGTGGTAATATCTCTGGCCTAGAGCCTTGCTCAATATCTGGTGGCAAGTTTCATAATCATAAGACAAACAAAATTTGGGTGCTAGTTCTATCACTCACTCTAGGTCCTCTACTGTTAGCATTAATTGTTTATGGGATCTCATACTTTTTTTGTCGAACTTCAAGCACAGAAGAATACAAGCCTGCACAAGAATTTCAAATTGAAAATCTATTTGAAATATGGAGCTTTGATGGCAAAATGGTGTATGAGAACATAATCGAAGCCACGGAAGATTTTGACAACAAACATCTCATTGGGGTTGGAGGACATGCAAGTGTTTACAAAGCAGAGTTGCCTACAGGTCAAGTGGTAGCTGTGAAGAAACTTCATTTATTACAAAATGAAGAAATGTCTAATATGAAAGCTTTCACAAATGAGATTCATGCTTTGACAGAAATTCGACATCGCAACATTGTGAAGTTATACGGGTTTTGTTTACATCGACTACACTCATTTTTGGTTTATGAATTCTTGGAGAAGGGTAGTGTGGACATCATTTTGAAGGACAATGAACAAGCTGCTGAATTTGATTGGAATAAGAGGGTGAATATTATTAAAGATATAGCTAATGCCTTATGCTATCTGCATCATGATTGTTCCCCTCCTATAGTTCATCGAGATATATCCAGCAAGAATGTTATTTTGGATTTGGAATATGTAGCTCATGTCTCAGATTTTGGAACATCTAAGTTTCTAAATCCCAATTCATCCAATATGACTTCTTTTGCAGGCACCTTTGGATATGCTGCTCCAGAACTTGCATACACAATGGAAGTAAATGAGAAATGTGATGTGTTTAGTTTTGGGATATTAACCTTGGAAATACTTTTTGGAAAGCACCCTGGAGATATTGTAACTTATTTGTGGCAACAACCTTCACAAAGTGTTATGGACATGAGACCTGATACTATGCAATTGATAGATAAGTTGGACCAGCGTGTCCCTCATCCCACAAATACCATTGTTCAAGAAGTGGCATCGATGATAAGGATTGCAGTTGCTTGCTTAACTGAAAGCCCGCGTTCTCGCCCTACCATGGAGCAGGTCTGCAGACAGTTTGTAATGTCATAA | 2721 | 0.3657 | MSCLLLFFYVFVMIKSPHAATKIKGREAESLLKWKESFDNQSKALLSSWIGNNPCSSWEGITCDDDSKSINKVNLTNIGLKGTLQSLNFSSLPKIRTLVLRNNFLYGIVPHHIGEMSSLKTLDLSINNLFGSIPLSIGNLINLDTINLSENNISGPLPFTIGNLTKLNILYLYSNDLTGQIPPFIDNLINLHTLYLSYNNLSEPIPFTIGNMTKLIRLSLFSNSFTKNIPTEINRLTDLKALDLYDNNFVGHLPHNICVGGKLEKFSAALNQFTGLVPESLKNCSSLKRLRLEQNQLTGNITNSFGVYPNLDYMELSDNNLYGQISPNWGKCKNLTSLKISNNNLTGSIPPELGRATNLHELNLSSNHLTGKIPKELENLSLLIKLSLSNNHLSGEVPEQIESLHELTALELAANNFSGFIPEKLGMLSRLLKLNLSQNKFEGNIPVEFGQLNVIENLDLSGNSMNGTIPAMLGQLNHLETLNLSHNNLSGTIPSSFVDMLSLTTVDVSYNQLEGPTPNITAFGRAPIEALTNNKGLCGNISGLEPCSISGGKFHNHKTNKIWVLVLSLTLGPLLLALIVYGISYFFCRTSSTEEYKPAQEFQIENLFEIWSFDGKMVYENIIEATEDFDNKHLIGVGGHASVYKAELPTGQVVAVKKLHLLQNEEMSNMKAFTNEIHALTEIRHRNIVKLYGFCLHRLHSFLVYEFLEKGSVDIILKDNEQAAEFDWNKRVNIIKDIANALCYLHHDCSPPIVHRDISSKNVILDLEYVAHVSDFGTSKFLNPNSSNMTSFAGTFGYAAPELAYTMEVNEKCDVFSFGILTLEILFGKHPGDIVTYLWQQPSQSVMDMRPDTMQLIDKLDQRVPHPTNTIVQEVASMIRIAVACLTESPRSRPTMEQVCRQFVMS* | 907 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mtr1g1292 | 906 | Pfam | Leucine rich repeat | 406 | 464 | IPR001611 | GO:0005515 | |
Mtr1g1292 | 906 | Pfam | Leucine rich repeat | 472 | 513 | IPR001611 | GO:0005515 | |
Mtr1g1292 | 906 | ProSiteProfiles | Leucine-rich repeat profile. | 478 | 499 | IPR001611 | GO:0005515 | |
Mtr1g1292 | 906 | Pfam | Leucine Rich Repeat | 358 | 380 | IPR001611 | GO:0005515 | |
Mtr1g1292 | 906 | SUPERFAMILY | L domain-like | 27 | 312 | - | - | |
Mtr1g1292 | 906 | SUPERFAMILY | Protein kinase-like (PK-like) | 612 | 902 | IPR011009 | - | |
Mtr1g1292 | 906 | Gene3D | Ribonuclease Inhibitor | 264 | 553 | IPR032675 | - | |
Mtr1g1292 | 906 | Gene3D | Ribonuclease Inhibitor | 24 | 180 | IPR032675 | - | |
Mtr1g1292 | 906 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 4 | 151 | - | - | |
Mtr1g1292 | 906 | PANTHER | LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED | 127 | 906 | - | - | |
Mtr1g1292 | 906 | Gene3D | Phosphorylase Kinase; domain 1 | 590 | 707 | - | - | |
Mtr1g1292 | 906 | SMART | LRR_typ_2 | 428 | 452 | IPR003591 | - | |
Mtr1g1292 | 906 | SMART | LRR_typ_2 | 476 | 499 | IPR003591 | - | |
Mtr1g1292 | 906 | SMART | LRR_typ_2 | 380 | 404 | IPR003591 | - | |
Mtr1g1292 | 906 | SMART | LRR_typ_2 | 164 | 187 | IPR003591 | - | |
Mtr1g1292 | 906 | SMART | LRR_typ_2 | 332 | 356 | IPR003591 | - | |
Mtr1g1292 | 906 | SMART | LRR_typ_2 | 188 | 212 | IPR003591 | - | |
Mtr1g1292 | 906 | SMART | LRR_typ_2 | 236 | 260 | IPR003591 | - | |
Mtr1g1292 | 906 | SMART | LRR_typ_2 | 116 | 140 | IPR003591 | - | |
Mtr1g1292 | 906 | SUPERFAMILY | L domain-like | 271 | 539 | - | - | |
Mtr1g1292 | 906 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 127 | 906 | - | - | |
Mtr1g1292 | 906 | PANTHER | LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN | 4 | 151 | - | - | |
Mtr1g1292 | 906 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 753 | 765 | IPR008266 | GO:0004672|GO:0006468 | |
Mtr1g1292 | 906 | ProSiteProfiles | Protein kinase domain profile. | 629 | 905 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr1g1292 | 906 | ProSiteProfiles | Leucine-rich repeat profile. | 358 | 381 | IPR001611 | GO:0005515 | |
Mtr1g1292 | 906 | Pfam | Leucine rich repeat N-terminal domain | 27 | 64 | IPR013210 | - | |
Mtr1g1292 | 906 | Pfam | Protein kinase domain | 630 | 902 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Mtr1g1292 | 906 | Gene3D | Transferase(Phosphotransferase) domain 1 | 708 | 905 | - | - | |
Mtr1g1292 | 906 | ProSitePatterns | Protein kinases ATP-binding region signature. | 635 | 658 | IPR017441 | GO:0005524 | |
Mtr1g1292 | 906 | Gene3D | Ribonuclease Inhibitor | 181 | 263 | IPR032675 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mtr1g1292 | Mtr-Chr1 | 15413466 | 15416707 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mtr1g1292 | 80 | 801 | Receptor kinase-like Gene Family | AT4G08850 | 45.144 | 0.0 | 625 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Mtr1g1292 | Pkinase | 6.4e-46 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mtr1g1292 | - | - | mtr:MTR_1g040615 | 1321.22 |