Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1291 ATGAAGCTCTTACCAATGCCATGTCTTATTTTGTTCTTCTATGTGTTTGTAATTGCAACATCACCTCATGCTGCAACAAAAATCCAAGGTAGCGAGGCTGATGCTCTATTGAAGTGGAAATCAAGCCTTGACAACCATAGCAGGGCATTTCTCTCTTCATGGATTGGTAATAATCCTTGTGGTTGGGAAGGAATCACGTGTGATTATGAATCGAAGTCCATCAACAAGGTAAATCTCACCAATATTGGACTAAAAGGTACACTTCAGAGTCTCAACTTCTCATCACTTCCAAAAATCCACACTTTAGTTTTAACAAACAACTTCTTGTACGGAGTTGTTCCACACCAAATTGGAGAGATGTCTAGTCTCAAAACTCTTAATTTGTCGATTAACAATCTCTTTGGGTCAATCCCACCATCCATAGGTAATTTGATTAATTTAGATACTATTGACCTTTCACAAAATACTCTCTCTGGACCAATTCCTTTCACTATCGGAAATTTAACGAAGCTAAGTGAATTGTATTTTTATTCAAATGCTCTCACTGGACAAATTCCACCTTCCATAGGTAACTTGATCAATTTGGATATTATTGACCTTTCAAGAAATCATCTCTCTGGACCAATTCCACCTTCCATAGGTAATTTGATTAATTTGGATTACTTTTCCCTTTCACAAAATAATCTCTCTGGACCAATTCCTTTCACTATTGGAAATTTGACAAAACTCAGTACATTATCTCTTTATTTAAATGCTCTCACTGGACAAATTCCACCTTCCATAGGTAACTTGATCAATTTGGATATTATTTACCTTAATGATAATGAACTCTCTGGACCATTTCCTTCGACTATCACAAATTTGACAAAACTCAGTACATTATCTCTTTATTTAAATGCTCTCACTGGACAAATTCCACCTTCCATAGGTAACTTGATCAATTTGGATAATATTTACCTTTCAAGAAATCATCTCTCTGGACCAATTCCTTCCACTATTGGAAATTTGACAAAACTCGGTACATTATCTCTTTATTTAAATGCTCTCACTGGACAAATTCCACCTTCCATAGGTAACTTGATCAATTTGGATAATATTTACCTTTCAAGAAATCATCTCTCTGGACCAATTCCACCTTCCATAGGTAATTTGATTAATTTGGATTACTTTTCCCTTTCACAAAATAATCTCTCTGGACCAATTCCTTCCACTATTGGAAATTTGACAAAACTCAGTACATTATCTCTTTATTTAAATGCTCTCACTGGACAAATTCCACCTTCCGTAGGTAACTTGATCAATTTGGATAATATTTCCCTTTCAAGAAATCATCTCTCTGGACCAATTCCACCTTCCATAGGTAATTTGACTAATTTGGATTACTTTTCCCTTTCACAAAATAATCTCTCTGGACCAATTCCTTCCACTATTGGAAATTTGACAAAACTCAGTGAAATACATCTTTCATTTAATTCTCTCACTGAGAATATTCCAACAGAAATGAATAGGCTTATCGATTTGGAAGTACTCCATTTATCTGATAATATTTTTGTTGGTCATTTACCTCACAATATTTGTGTTGGTGGGAAGTTAAAAACATTCACTGCTGCACTTAACCAGTTCACAGGCCTAGTTCCAGAGAGTTTGAAGAATTGCTCAAGCCTTACGAGACTGAGGCTTGATCAAAACCAACTTACTGGAAATATAACAGAGAGTTTTGGTGTGTATCCAAACTTGGACTACATGGAATTGAGTGATAATAATTTTTATGGTCATCTTTCTCCAAATTGGGGAAAGTGCAAGATTCTCACAAGCCTAAAAATCTCTGGTAATAATTTAACAGGAAGAATACCACCAGAACTAGGAAGTGCAACAAATTTACAGGAGCTTAACTTGTCTTCAAACCATCTAATGGGAAAAATTCCAAAGGAGTTAGAATACTTATCTTTGTTGTTCAAACTCTCCTTAAGTAACAATCATCTTTCTGGAGAAGTTCCTGTACAAATTGCATCATTGCATCAACTAACTGCATTGGAGCTTGCAATAAATAATTTGAGTGGCTTCATCCCTAAAAAACTTGGTATGTTGTCTATGTTATTGCAGTTAAATTTGAGCCAAAATAAGTTTGAGGGGAACATTCCTGTTGAGTTTGGCCAATTGAATGTTATTGAAAATCTTGATCTTAGTGGGAATTCTATGAATGGAACCATACCAGCAATGCTTGGCCAGTTAAATCACTTAGAAACATTGAATCTCTCACATAACAATCTCTCTGGTACCATTCCCTCAAGCTTTGTTGATATGTTAAGCTTGACAACTGTTGATATATCTTACAACCAATTGGAGGGTCCGATTCCAAATGTTACAGCTTTCAAAAGAGCTCCAATTGAAGCATTGACAAATAACAAAGGCTTATGTGGTAATGTCTCTGGCCTAGAGCCTTGCTCAACATCTGGTGGCAAATTTCATTATCATAAGACTAACAAAATTTTGGTGCTAGTTCTATCCCTCACTCTAGGCCCTCTACTGTTAGCATTAATTGTTTATGGGATCTCATACCTTTTGTGTCGAACTTCAAGCACAAAAGAATACAAGCCTGTACAAGAATTTCAAATTGAAAATCTATTTGAAATATGGAGCTTTGATGGCAAAATGGTGTATGAGAACATAATCGAAGCCACAGAAGATTTTGACAACAAGCATCTCATTGGGGTTGGAGGACATGGAAATGTTTACAAAGCAGAACTGCCTACAGGTCAAGTTGTAGCTGTGAAGAAACTTCACTCATTACAAAATGAAGAAATGCCAAATCGGAAAGCTTTCACAAATGAGATCCATGCTTTGACAGAAATTCGACATCGCAACATTGTGAAGTTATACGGCTTTTGTTCACATCGACTACACTCATTTTTGGTTTATGAATTCTTGGAGAAGGGTAGCTTGGACAACATTTTGAAGGACAATGAACAAGCTGGTGAATTTGATTGGAATAAGAGGGTGAATATTATTAAAGATATAGCTAATGCCTTATTCTATCTGCATCATGACTGCTCGCCTCCTATTGTTCATCGAGATATATCCAGCAAGAATGTTATTTTGGATTTGGAATATGTAGCTCATGTCTCAGACTTTGGAACATCTAAGTTTCTAAATCCCAATTCATCCAATATGACTTCTTTTGCAGGCACCTTTGGATATGCCGCTCCAGAACTTGCATACACAATGGAAGTAAATAAGAAATGCGATGTATATAGTTTTGGGATATTAACCTTGGAAATACTTTTTGGAAAGCACCCTGGAGATATTGTAACTTATTTGTGGCAACAACCTTCACAAAGTGTTACGGACCTGAGACTTGATACGATGCCATTGATAGATAAGTTGGACCAGCGTCTCCCTCATCCCACAAAAACCATTGTTCAAGAGGTGGCATCGATGATAAGGATTGCAGTTGCTTGCTTAACAGAAAGCCCGCTTTCTCGCCCTACCATGGAGCAGGTCTGCAGGCAGTTTGTAATGTCATAA 3525 0.3648 MKLLPMPCLILFFYVFVIATSPHAATKIQGSEADALLKWKSSLDNHSRAFLSSWIGNNPCGWEGITCDYESKSINKVNLTNIGLKGTLQSLNFSSLPKIHTLVLTNNFLYGVVPHQIGEMSSLKTLNLSINNLFGSIPPSIGNLINLDTIDLSQNTLSGPIPFTIGNLTKLSELYFYSNALTGQIPPSIGNLINLDIIDLSRNHLSGPIPPSIGNLINLDYFSLSQNNLSGPIPFTIGNLTKLSTLSLYLNALTGQIPPSIGNLINLDIIYLNDNELSGPFPSTITNLTKLSTLSLYLNALTGQIPPSIGNLINLDNIYLSRNHLSGPIPSTIGNLTKLGTLSLYLNALTGQIPPSIGNLINLDNIYLSRNHLSGPIPPSIGNLINLDYFSLSQNNLSGPIPSTIGNLTKLSTLSLYLNALTGQIPPSVGNLINLDNISLSRNHLSGPIPPSIGNLTNLDYFSLSQNNLSGPIPSTIGNLTKLSEIHLSFNSLTENIPTEMNRLIDLEVLHLSDNIFVGHLPHNICVGGKLKTFTAALNQFTGLVPESLKNCSSLTRLRLDQNQLTGNITESFGVYPNLDYMELSDNNFYGHLSPNWGKCKILTSLKISGNNLTGRIPPELGSATNLQELNLSSNHLMGKIPKELEYLSLLFKLSLSNNHLSGEVPVQIASLHQLTALELAINNLSGFIPKKLGMLSMLLQLNLSQNKFEGNIPVEFGQLNVIENLDLSGNSMNGTIPAMLGQLNHLETLNLSHNNLSGTIPSSFVDMLSLTTVDISYNQLEGPIPNVTAFKRAPIEALTNNKGLCGNVSGLEPCSTSGGKFHYHKTNKILVLVLSLTLGPLLLALIVYGISYLLCRTSSTKEYKPVQEFQIENLFEIWSFDGKMVYENIIEATEDFDNKHLIGVGGHGNVYKAELPTGQVVAVKKLHSLQNEEMPNRKAFTNEIHALTEIRHRNIVKLYGFCSHRLHSFLVYEFLEKGSLDNILKDNEQAGEFDWNKRVNIIKDIANALFYLHHDCSPPIVHRDISSKNVILDLEYVAHVSDFGTSKFLNPNSSNMTSFAGTFGYAAPELAYTMEVNKKCDVYSFGILTLEILFGKHPGDIVTYLWQQPSQSVTDLRLDTMPLIDKLDQRLPHPTKTIVQEVASMIRIAVACLTESPLSRPTMEQVCRQFVMS* 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1291 1174 ProSiteProfiles Leucine-rich repeat profile. 626 649 IPR001611 GO:0005515
Mtr1g1291 1174 Gene3D Ribonuclease Inhibitor 366 475 IPR032675 -
Mtr1g1291 1174 Gene3D Ribonuclease Inhibitor 476 821 IPR032675 -
Mtr1g1291 1174 Gene3D Phosphorylase Kinase; domain 1 857 975 - -
Mtr1g1291 1174 Pfam Leucine rich repeat 724 781 IPR001611 GO:0005515
Mtr1g1291 1174 ProSiteProfiles Leucine-rich repeat profile. 746 767 IPR001611 GO:0005515
Mtr1g1291 1174 SUPERFAMILY L domain-like 532 807 - -
Mtr1g1291 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 174 324 - -
Mtr1g1291 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 120 231 - -
Mtr1g1291 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 128 - -
Mtr1g1291 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 223 372 - -
Mtr1g1291 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 296 428 - -
Mtr1g1291 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 373 1174 - -
Mtr1g1291 1174 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 342 462 - -
Mtr1g1291 1174 Pfam Protein kinase domain 898 1170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1291 1174 Gene3D Ribonuclease Inhibitor 198 363 IPR032675 -
Mtr1g1291 1174 SUPERFAMILY Protein kinase-like (PK-like) 880 1170 IPR011009 -
Mtr1g1291 1174 Pfam Leucine rich repeat N-terminal domain 31 68 IPR013210 -
Mtr1g1291 1174 ProSiteProfiles Protein kinase domain profile. 897 1173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr1g1291 1174 SUPERFAMILY RNI-like 252 589 - -
Mtr1g1291 1174 SMART LRR_sd22_2 456 482 - -
Mtr1g1291 1174 SMART LRR_sd22_2 168 194 - -
Mtr1g1291 1174 SMART LRR_sd22_2 624 650 - -
Mtr1g1291 1174 SMART LRR_sd22_2 288 317 - -
Mtr1g1291 1174 SMART LRR_sd22_2 240 266 - -
Mtr1g1291 1174 SMART LRR_sd22_2 384 410 - -
Mtr1g1291 1174 SMART LRR_sd22_2 336 365 - -
Mtr1g1291 1174 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1021 1033 IPR008266 GO:0004672|GO:0006468
Mtr1g1291 1174 Gene3D Ribonuclease Inhibitor 29 187 IPR032675 -
Mtr1g1291 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 342 462 - -
Mtr1g1291 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 223 372 - -
Mtr1g1291 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 174 324 - -
Mtr1g1291 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 373 1174 - -
Mtr1g1291 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 24 128 - -
Mtr1g1291 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 120 231 - -
Mtr1g1291 1174 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 296 428 - -
Mtr1g1291 1174 SUPERFAMILY L domain-like 58 350 - -
Mtr1g1291 1174 ProSitePatterns Protein kinases ATP-binding region signature. 903 926 IPR017441 GO:0005524
Mtr1g1291 1174 SMART LRR_typ_2 288 312 IPR003591 -
Mtr1g1291 1174 SMART LRR_typ_2 240 264 IPR003591 -
Mtr1g1291 1174 SMART LRR_typ_2 120 144 IPR003591 -
Mtr1g1291 1174 SMART LRR_typ_2 408 432 IPR003591 -
Mtr1g1291 1174 SMART LRR_typ_2 168 191 IPR003591 -
Mtr1g1291 1174 SMART LRR_typ_2 192 216 IPR003591 -
Mtr1g1291 1174 SMART LRR_typ_2 648 672 IPR003591 -
Mtr1g1291 1174 SMART LRR_typ_2 696 720 IPR003591 -
Mtr1g1291 1174 SMART LRR_typ_2 480 504 IPR003591 -
Mtr1g1291 1174 SMART LRR_typ_2 744 767 IPR003591 -
Mtr1g1291 1174 SMART LRR_typ_2 336 360 IPR003591 -
Mtr1g1291 1174 Gene3D Transferase(Phosphotransferase) domain 1 976 1173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1291 Mtr-Chr1 15406423 15410524 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1291 2 618 Receptor kinase-like Gene Family AT4G08850 37.926 7.88e-119 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr1g1291 Pkinase 2.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1291 - - mtr:MTR_1g040615 1966.43