Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr1g1288 ATGGCAGAAGGGATGAAGTCACTAGTGAGGACAACAAGTTTATCAACAAAGAATAGTTGGATTAAGTTCGATGCTAATGGACATAGTTCCTTACTCGATGTAGACAAGTTTGAAATCATGCATCAAGTTCGTATTCAGGCTCGTGATCTTAGGATTATTGATCCTCTTCTCTCTTACCCTTCAACTATTCTAAGTAGAAAAGAGTTTATTGTTCTTAACTTTGAGCACATCAAGGCAATCATCACTGCTAAAGAGGTGTTTTTGCAAGACCCAACAGATGAAAATATCATCCCTGTTGTTGAGGAACTAAAAAGGAGATTGTTTCAAGGAGATGATCAAGAGATGAATCCACTTGATGTTGAAATAGATGAAGATGATGAGTCATCTTTTGAATTCCGAGCACTAGAGATATTTCTTGAATCAATCTGTAGCTACCTTAGTGCACGAACTATAGAATTGGAGATGGCTACTTATCCTGCACTAGATGAACTTACCACCAAGATCAATGCTCGAAATTTAAACAGAGTTCGTATATTGAAGAGTGCATTGTCAAAGCTTACTGTTAGGGTTCAAAAGGTTTATTTCAATCAAATCGATGGTACTTCGAATAAATTGATAACGCTAAGAGAGTATATTGATGATACAGAAGATTATATTAATATTCAGATGGACAACTATCGAAATCAGCTGATTCAGCTAGAGATATTTCTTATCGCAGGAGAACTTTCTCTATCATTTTATGCATTGGTGATTGGAATATTTAGCATGAATATTCCATTTACTTGGACAAAAGACCATGGTTACATGTTCAAATGGGTGGTTATTTTTCCAGGATTTTTTTCCATTTCTATATTTCTAATCATAGTTGCCTATGCTCGCAAAAAGGGGTTGATTGGATCATGA 903 0.3544 MAEGMKSLVRTTSLSTKNSWIKFDANGHSSLLDVDKFEIMHQVRIQARDLRIIDPLLSYPSTILSRKEFIVLNFEHIKAIITAKEVFLQDPTDENIIPVVEELKRRLFQGDDQEMNPLDVEIDEDDESSFEFRALEIFLESICSYLSARTIELEMATYPALDELTTKINARNLNRVRILKSALSKLTVRVQKVYFNQIDGTSNKLITLREYIDDTEDYINIQMDNYRNQLIQLEIFLIAGELSLSFYALVIGIFSMNIPFTWTKDHGYMFKWVVIFPGFFSISIFLIIVAYARKKGLIGS* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr1g1288 300 Gene3D Magnesium transport protein CorA, transmembrane region 194 230 - -
Mtr1g1288 300 Gene3D Magnesium transport protein CorA, transmembrane region 97 193 - -
Mtr1g1288 300 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 193 300 IPR039204 -
Mtr1g1288 300 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 15 193 IPR039204 -
Mtr1g1288 300 CDD Mrs2_Mfm1p-like 20 297 IPR039204 -
Mtr1g1288 300 Gene3D - 6 91 - -
Mtr1g1288 300 PANTHER MAGNESIUM TRANSPORTER MRS2-I 15 193 - -
Mtr1g1288 300 PANTHER MAGNESIUM TRANSPORTER MRS2-I 193 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr1g1288 Mtr-Chr1 15364761 15382782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr1g1288 192 273 MRS2 Gene Family AT5G64560 69.512 1.07e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr1g1288 K16075 - sspl:121801880 296.975